RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 LHX9Q9NQ69 397 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TMEM106BQ9NUM4 274 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SIGLEC7Q9Y286 467 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR51B2Q9Y5P1 312 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 NRAPQ86VF7 1730 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SIPA1L1O43166 1804 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ZNF264O43296 627 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SLC25A6P12236 298 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 CCL5P13501 91 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ATP6V0CP27449 155 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 UBE2NP61088 152 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 RND3P61587 244 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 DCAF7P61962 342 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 WDR25Q64LD2 544 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 RTN4RL1Q86UN2 441 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR2A1Q8NGT9 310 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 MRPL30Q8TCC3 161 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 Q96M85 177 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ZNF646O15015 1829 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 TRPM7Q96QT4 1865 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TRAV36DV7A0A075B6V5 113 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 FAM24AA6NFZ4 105 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 VENTXO95231 258 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR5AL1P0C617 328 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 KLK2P20151 261 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SELENOTP62341 195 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 EWSR1Q01844 656 aaKnown RBP eCLIP4.49□□□□□ -1.69
SKP1-202ENST00000353411 OCIAD2Q56VL3 154 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TMEM136Q6ZRR5 245 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 MKXQ8IYA7 352 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 METTL27Q8N6F8 245 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 MORN4Q8NDC4 146 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR11L1Q8NGX0 322 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SPPL3Q8TCT6 385 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TMEM170AQ8WVE7 144 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 RNF133Q8WVZ7 376 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 MUCL1Q96DR8 90 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 RBKSQ9H477 322 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 EPHX3Q9H6B9 360 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 FKRPQ9H9S5 495 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 CUTCQ9NTM9 273 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TMEM30AQ9NV96 361 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SSUH2Q9Y2M2 353 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TRBV23OR9-2A0A075B6M9 112 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SLURP2P0DP57 97 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ZNF117Q03924 483 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 PLCXD2Q0VAA5 305 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 LTC4SQ16873 150 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 FAM57BQ71RH2 274 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR4A16Q8NH70 328 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 GPBAR1Q8TDU6 330 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 IL1F10Q8WWZ1 152 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 DIO2Q92813 273 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 RNF39Q9H2S5 420 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 C19orf53Q9UNZ5 99 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 EDDM13A0A1B0GTR0 161 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 SSC5DA1L4H1 1573 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 FBLL1A6NHQ2 334 aaKnown RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 PLPP1O14494 284 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 B4GALT2O60909 372 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ESDP10768 282 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ERGP11308 486 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ASCL1P50553 236 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 CD99L2Q8TCZ2 262 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 DAZLQ92904 295 aaKnown RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 ANAPC13Q9BS18 74 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 IGLV3-10A0A075B6K4 115 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 TRAV9-1A0A075B6T8 112 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 FAM221AA4D161 298 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ZNF860A6NHJ4 632 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ZNF891A8MT65 544 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 FFAR1O14842 300 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 IGHV2-5P01817 119 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 G6PCP35575 357 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 PLP2Q04941 152 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 VAX1Q5SQQ9 334 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ZNF664Q8N3J9 261 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 TTC9BQ8N6N2 239 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 DMBX1Q8NFW5 382 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 MBD3L1Q8WWY6 194 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 RNF125Q96EQ8 232 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 DEC1Q9P2X7 70 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 CES1P1Q9UKY3 287 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ABCA3Q99758 1704 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 HSD17B6O14756 317 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 HCRTR1O43613 425 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 CD1BP29016 333 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 SHHQ15465 462 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ZNF770Q6IQ21 691 aaPredicted RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 Q8NFD4 153 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ZNF385AQ96PM9 386 aaKnown RBP4.48□□□□□ -1.69
SKP1-202ENST00000353411 SPXQ9BT56 116 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 OR2D2Q9H210 308 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 GLRX2Q9NS18 164 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 ADRA2AP08913 450 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 NPPBP16860 134 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 IER3P46695 156 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 COL10A1Q03692 680 aa4.48□□□□□ -1.69
SKP1-202ENST00000353411 HNRNPA1L2Q32P51 320 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms