RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 HOGA1Q86XE5 327 aa7□□□□□ -1.29
CD44-205ENST00000352818 SAXO1Q8IYX7 474 aa7□□□□□ -1.29
CD44-205ENST00000352818 C9orf62Q8N4C0 152 aa7□□□□□ -1.29
CD44-205ENST00000352818 CSNK2A3Q8NEV1 391 aa7□□□□□ -1.29
CD44-205ENST00000352818 Q8NFD4 153 aa7□□□□□ -1.29
CD44-205ENST00000352818 BEST4Q8NFU0 473 aa7□□□□□ -1.29
CD44-205ENST00000352818 OR13C8Q8NGS7 320 aa7□□□□□ -1.29
CD44-205ENST00000352818 OR8S1Q8NH09 359 aa7□□□□□ -1.29
CD44-205ENST00000352818 GRPEL2Q8TAA5 225 aa7□□□□□ -1.29
CD44-205ENST00000352818 NPRL2Q8WTW4 380 aa7□□□□□ -1.29
CD44-205ENST00000352818 SNAPC3Q92966 411 aa7□□□□□ -1.29
CD44-205ENST00000352818 DVL3Q92997 716 aaPredicted RBP7□□□□□ -1.29
CD44-205ENST00000352818 SARAFQ96BY9 339 aa7□□□□□ -1.29
CD44-205ENST00000352818 MS4A3Q96HJ5 214 aa7□□□□□ -1.29
CD44-205ENST00000352818 ARHGAP5-AS1Q96IT6 56 aa7□□□□□ -1.29
CD44-205ENST00000352818 ZNF75AQ96N20 296 aa7□□□□□ -1.29
CD44-205ENST00000352818 FAM210AQ96ND0 272 aa7□□□□□ -1.29
CD44-205ENST00000352818 WFIKKN1Q96NZ8 548 aa7□□□□□ -1.29
CD44-205ENST00000352818 TMEM246Q9BRR3 403 aa7□□□□□ -1.29
CD44-205ENST00000352818 PECRQ9BY49 303 aa7□□□□□ -1.29
CD44-205ENST00000352818 TMPRSS13Q9BYE2 586 aa7□□□□□ -1.29
CD44-205ENST00000352818 ZMAT3Q9HA38 289 aaKnown RBP7□□□□□ -1.29
CD44-205ENST00000352818 MGAT4CQ9UBM8 478 aa7□□□□□ -1.29
CD44-205ENST00000352818 EIF3KQ9UBQ5 218 aaKnown RBP7□□□□□ -1.29
CD44-205ENST00000352818 ZNF69Q9UC07 566 aa7□□□□□ -1.29
CD44-205ENST00000352818 PRSS50Q9UI38 385 aa7□□□□□ -1.29
CD44-205ENST00000352818 ELF5Q9UKW6 265 aaPredicted RBP7□□□□□ -1.29
CD44-205ENST00000352818 MALRD1Q5VYJ5 2156 aa7□□□□□ -1.29
CD44-205ENST00000352818 IGHV4-30-2A0A087WSY4 118 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 A0A096LPE4 126 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 A0A1W2PPZ6 126 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 PQLC2LA1A4F0 135 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A10PA6NDY2 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A18PA6NE21 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 ZNF503-AS2A6NEH8 195 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A16PA6NEW6 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A20PA6NIJ5 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A8PA6NJQ4 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A7PA6NKC0 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A22PA8MWA6 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A12PA8MX19 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A5PA8MXJ8 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A23PA8MXZ1 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 G3V3Q6 166 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 TPD52L2O43399 206 aaKnown RBP6.99□□□□□ -1.29
CD44-205ENST00000352818 NDUFS7O75251 213 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 RAD51DO75771 328 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 IL2RAP01589 272 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 RLN1P04808 185 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FCER2P06734 321 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 OR4E1P0C645 316 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A15PP0C7V4 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A13PP0C7W8 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A14PP0C7W9 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM90A24PP0C7X0 464 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 TMEM225BP0DP42 221 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 CD79AP11912 226 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 ZNF16P17020 682 aaPredicted RBP6.99□□□□□ -1.29
CD44-205ENST00000352818 COX5AP20674 150 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 SERPINA2P20848 420 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 DTYMKP23919 212 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 BLVRBP30043 206 aaPredicted RBP6.99□□□□□ -1.29
CD44-205ENST00000352818 HRH1P35367 487 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 APLNRP35414 380 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 TIMP3P35625 211 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 TAS2R31P59538 309 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 RAB1AP62820 205 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 SRSF4Q08170 494 aaKnown RBP6.99□□□□□ -1.29
CD44-205ENST00000352818 MALLQ13021 153 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 PDZK1IP1Q13113 114 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 RSU1Q15404 277 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 SF3B4Q15427 424 aaKnown RBP eCLIP6.99□□□□□ -1.29
CD44-205ENST00000352818 NHLRC3Q5JS37 347 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 TREML4Q6UXN2 200 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 TFAP2EQ6VUC0 442 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 Q6ZT83 130 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FAM214BQ7L5A3 538 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 MRPL21Q7Z2W9 205 aaKnown RBP6.99□□□□□ -1.29
CD44-205ENST00000352818 SLC25A42Q86VD7 318 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 FTMTQ8N4E7 242 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 GVQW1Q8N7I0 195 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 C1orf162Q8NEQ5 155 aaPredicted RBP6.99□□□□□ -1.29
CD44-205ENST00000352818 OR2AK2Q8NG84 335 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 OR56B2PQ8NGI1 322 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 OR5D18Q8NGL1 313 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 OR6K3Q8NGY3 331 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 TMEM171Q8WVE6 324 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 WNT2BQ93097 391 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 CHST6Q9GZX3 395 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 POFUT1Q9H488 388 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 BEX1Q9HBH7 125 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 PLSCR3Q9NRY6 295 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 PIPOXQ9P0Z9 390 aa6.99□□□□□ -1.29
CD44-205ENST00000352818 SACSQ9NZJ4 4579 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 FAM230AA0A1W2PPH8 454 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 TMEM89A2RUT3 159 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 C5orf49A4QMS7 147 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 AHRRA9YTQ3 701 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 TCF21O43680 179 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 PLAUP00749 431 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms