RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CMPK1P30085 196 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 FAM110CQ1W6H9 321 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 GNPNAT1Q96EK6 184 aaPredicted RBP11.55□□□□□ -0.56
IFT88-202ENST00000351808 KLHDC3Q9BQ90 382 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 VN1R3Q9BXE9 311 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 MAGT1Q9H0U3 335 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 NAA60Q9H7X0 242 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 TMEM9BQ9NQ34 198 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 BLVRBP30043 206 aaPredicted RBP11.55□□□□□ -0.56
IFT88-202ENST00000351808 DPTQ07507 201 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 ACKR1Q16570 336 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 ZNF787Q6DD87 383 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.55□□□□□ -0.56
IFT88-202ENST00000351808 ARHGEF39Q8N4T4 335 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 TMEM252Q8N6L7 170 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 OR5L1Q8NGL2 311 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 ZNF552Q9H707 407 aaPredicted RBP11.55□□□□□ -0.56
IFT88-202ENST00000351808 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
IFT88-202ENST00000351808 NAT8Q9UHE5 227 aa11.55□□□□□ -0.56
IFT88-202ENST00000351808 HRKO00198 91 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 TTRP02766 147 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 ABCA11PQ4W5N1 156 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 WBP2NLQ6ICG8 309 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 CBLN3Q6UW01 205 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 ZNF765Q7L2R6 523 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 ARRDC3Q96B67 414 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 C18orf12Q96KH6 178 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 GABRG3Q99928 467 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 OR10A2Q9H208 303 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 PHF3Q92576 2039 aaKnown RBP11.54□□□□□ -0.56
IFT88-202ENST00000351808 RTTNQ86VV8 2226 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 LRRC3CA6NJW4 275 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 HSBP1L1C9JCN9 74 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 HLA-HP01893 362 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 ASGR1P07306 291 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 CTSBP07858 339 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 PNMTP11086 282 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 FXYD4P59646 89 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 RPL23P62829 140 aaKnown RBP11.54□□□□□ -0.56
IFT88-202ENST00000351808 PDGFRLQ15198 375 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 LIAT1Q6ZQX7 453 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 CISD2Q8N5K1 135 aaKnown RBP11.54□□□□□ -0.56
IFT88-202ENST00000351808 ZNF709Q8N972 641 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 CTHRC1Q96CG8 243 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 PGAM5Q96HS1 289 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 COX14Q96I36 57 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 GPER1Q99527 375 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 HDHD3Q9BSH5 251 aaPredicted RBP11.54□□□□□ -0.56
IFT88-202ENST00000351808 CSTL1Q9H114 145 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 SHANK1Q9Y566 2161 aa11.54□□□□□ -0.56
IFT88-202ENST00000351808 FOXS1O43638 330 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 MRPS34P82930 218 aaKnown RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 C1orf185Q5T7R7 199 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 ZNF440Q8IYI8 595 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 OR5D18Q8NGL1 313 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 OR4D5Q8NGN0 318 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 THAP3Q8WTV1 239 aaPredicted RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 RPUSD4Q96CM3 377 aaKnown RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 IMMP2LQ96T52 175 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 PLEKHF2Q9H8W4 249 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 MANBALQ9NQG1 85 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 NXT1Q9UKK6 140 aaKnown RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 A0A1W2PRU2 124 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 SSSCA1O60232 199 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 TCN2P20062 427 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 MEX3BQ6ZN04 569 aaKnown RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 LINC01551Q86U37 167 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 H1FOOQ8IZA3 346 aaPredicted RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 CMTM2Q8TAZ6 248 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 NUDT11Q96G61 164 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 CAPNS2Q96L46 248 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 OR51I2Q9H344 312 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 ELL3Q9HB65 397 aaPredicted RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 RPRMQ9NS64 109 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 TRAPPC1Q9Y5R8 145 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 TRAV1-1A0A0B4J248 108 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 TRAV39A0A0B4J263 110 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 TOMM40O96008 361 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 FBXO42Q6P3S6 717 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 FAM180AQ6UWF9 173 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 MSI2Q96DH6 328 aaKnown RBP11.53□□□□□ -0.56
IFT88-202ENST00000351808 HSPB9Q9BQS6 159 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 PECRQ9BY49 303 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 C11orf1Q9H5F2 150 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 FBRSQ9HAH7 460 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 LAMTOR2Q9Y2Q5 125 aa11.53□□□□□ -0.56
IFT88-202ENST00000351808 ARHGAP21Q5T5U3 1957 aa11.52□□□□□ -0.56
IFT88-202ENST00000351808 TRAV34A0A0B4J273 112 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 A0A1W2PNV4 684 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 GRIFINA4D1Z8 144 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 NKX2-6A6NCS4 301 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 ZNF823P16415 610 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 ZNF20P17024 532 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 ECI1P42126 302 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 PRDX4Q13162 271 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 CD226Q15762 336 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms