RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SLC35D2Q76EJ3 337 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 ATP5L2Q7Z4Y8 100 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 WIPF2Q8TF74 440 aaPredicted RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 BLNKQ8WV28 456 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 MRAP2Q96G30 205 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 SOSTQ9BQB4 213 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 DEPPQ9NTK1 212 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 MBNL3Q9NUK0 354 aaKnown RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 A0A1W2PR77 199 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 TMEM218A2RU14 115 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 ADRA2AP08913 450 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 LIMS3P0CW19 117 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 LIMS4P0CW20 117 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 TAGLN2P37802 199 aaKnown RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 TBPL1P62380 186 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 KLF9Q13886 244 aaPredicted RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 C5orf46Q6UWT4 87 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 MBOAT2Q6ZWT7 520 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 OR2AP1Q8NGE2 309 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 SNRNP40Q96DI7 357 aaKnown RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 METTL26Q96S19 204 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 CDCA3Q99618 268 aaPredicted RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 GABRG3Q99928 467 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 PATZ1Q9HBE1 687 aaKnown RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 ZNF331Q9NQX6 463 aaPredicted RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 MMP26Q9NRE1 261 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 FOXJ3Q9UPW0 622 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 SIPA1L1O43166 1804 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 P2RY10O00398 339 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 TRAF3IP2O43734 574 aaPredicted RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 OR12D2P58182 307 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 SSPNQ14714 243 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 OR6T1Q8NGN1 323 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 GHSRQ92847 366 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 TAAR8Q969N4 342 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 FGGYQ96C11 551 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 SULT4A1Q9BR01 284 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 SEC11CQ9BY50 192 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 DSPPQ9NZW4 1301 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 CBR3O75828 277 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 FBP1P09467 338 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 FAM106CPP0CH98 169 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 APLNRP35414 380 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 LAGE3Q14657 143 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 FA2HQ7L5A8 372 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 EXTL1Q92935 676 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 ANKRD9Q96BM1 317 aaPredicted RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 MRPS24Q96EL2 167 aaKnown RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 BTAF1O14981 1849 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 TRAV26-1A0A087WT03 109 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 LIM2P55344 173 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 ZP1P60852 638 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 ZNF345Q14585 488 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 BPIFA4PQ86YQ2 179 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 WDFY1Q8IWB7 410 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 OR2T27Q8NH04 317 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 GLYATL2Q8WU03 294 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 C4orf45Q96LM5 186 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 OR52D1Q9H346 318 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 ASCL3Q9NQ33 180 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 NEU3Q9UQ49 428 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 MBLAC1A4D2B0 266 aaPredicted RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 OR5K4A6NMS3 321 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 PROB1E7EW31 1015 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 AGPAT2O15120 278 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 CFDP00746 253 aaPredicted RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 IFNA2P01563 188 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 IGHA1P01876 353 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 MT-ND4LP03901 98 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 IL4P05112 153 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 CXCL2P19875 107 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 PFN3P60673 137 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 RNASE10Q5GAN6 216 aaKnown RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 ZNF562Q6V9R5 426 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 SYS1Q8N2H4 156 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 C10orf111Q8N326 155 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 TOLLIPQ9H0E2 274 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 HEXA-AS1Q9H8Q6 139 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 RASL12Q9NYN1 266 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 SLC35A3Q9Y2D2 325 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 CHST2Q9Y4C5 530 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 CITO14578 2027 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 TRBV5-4A0A0C4DH59 114 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 FAM240AA0A1B0GVK7 77 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 FAM90A20PA6NIJ5 464 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 DNASE2O00115 360 aaPredicted RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 OR2T1O43869 369 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 APOBEC1P41238 236 aaKnown RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 ZIC1Q15915 447 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 FAM109BQ6ICB4 259 aaPredicted RBP5.2□□□□□ -1.58
RFC1-201ENST00000349703 FAM166AQ6J272 317 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 OR2W3Q7Z3T1 314 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 OR5AK2Q8NH90 309 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 WDR13Q9H1Z4 485 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 CD84Q9UIB8 345 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 TMEM14AQ9Y6G1 99 aa5.2□□□□□ -1.58
RFC1-201ENST00000349703 A0A087WZ39 114 aa5.19□□□□□ -1.58
RFC1-201ENST00000349703 ZNF736B4DX44 427 aaPredicted RBP5.19□□□□□ -1.58
RFC1-201ENST00000349703 DCTN6O00399 190 aa5.19□□□□□ -1.58
RFC1-201ENST00000349703 TOX3O15405 576 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms