RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 ABHD17BQ5VST6 288 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 MSI2Q96DH6 328 aaKnown RBP13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 ZNF845Q96IR2 970 aaPredicted RBP13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 PINLYPA6NC86 204 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 ZNF724A8MTY0 619 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 C21orf140B9A014 251 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 ZNF587BE7ETH6 402 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 GPR31O00270 319 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 GLAP06280 429 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 ADCYAP1P18509 176 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 LHX2P50458 406 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 FXYD4P59646 89 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 ARF1P84077 181 aaKnown RBP13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 SWI5Q1ZZU3 235 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 HAGHLQ6PII5 290 aaPredicted RBP13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 CPEB3Q8NE35 698 aaKnown RBP13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 LYPD6BQ8NI32 183 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 NRIP2Q9BQI9 281 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 C12orf49Q9H741 205 aa13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 RCC2Q9P258 522 aaKnown RBP13.35□□□□□ -0.27
TNFSF13-202ENST00000349228 MED12Q93074 2177 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 RNASEK-C17orf49H0YIS7 233 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 H7C2Y5 167 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 ST8SIA3O43173 380 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 DIRAS3O95661 229 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 JMJD7P0C870 316 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 ARR3P36575 388 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 LPAR6P43657 344 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 RAB5CP51148 216 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 AKR1C2P52895 323 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 GUCA2BQ16661 112 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 MPV17LQ2QL34 196 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 SLC25A26Q70HW3 274 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 LDLRAD3Q86YD5 345 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 SNIP1Q8TAD8 396 aaKnown RBP13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 GLYATL2Q8WU03 294 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 APOBEC3DQ96AK3 386 aaPredicted RBP13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 MARS2Q96GW9 593 aaKnown RBP13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 ZNF703Q9H7S9 590 aaPredicted RBP13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 SLC7A10Q9NS82 523 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 EYSQ5T1H1 3165 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 PIGBOS1A0A0B4J2F0 54 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 SIGLEC5O15389 551 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 FBXO24O75426 580 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 OR7C1O76099 320 aaPredicted RBP13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 CDS2O95674 445 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 CD5P06127 495 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 CTXN2P0C2S0 81 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 DVL1P1P54792 670 aaPredicted RBP13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 FGF12P61328 243 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 RND3P61587 244 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 SIGLEC14Q08ET2 396 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 HMGN3Q15651 99 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 ZNF124Q15973 351 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 CEACAM21Q3KPI0 293 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 SP6Q3SY56 376 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 KRBOX4Q5JUW0 171 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 SPINK14Q6IE38 97 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 DPPA2Q7Z7J5 298 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 MKXQ8IYA7 352 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 ABHD14BQ96IU4 210 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 TLNRD1Q9H1K6 362 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 RIMS4Q9H426 269 aaPredicted RBP13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 PLK3Q9H4B4 646 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 ZNF581Q9P0T4 197 aa13.34□□□□□ -0.27
TNFSF13-202ENST00000349228 NEURL1O76050 574 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 PPYP01298 95 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 HEXAP06865 529 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 NME2P22392 152 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 AADACP22760 399 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 CLDN18P56856 261 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 SRSF3P84103 164 aaKnown RBP13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 PHLDA2Q53GA4 152 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 FAM76BQ5HYJ3 339 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 FBXW12Q6X9E4 464 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 MRPL21Q7Z2W9 205 aaKnown RBP13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 LYZL2Q7Z4W2 148 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 LINC00596Q86U02 117 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 CALHM1Q8IU99 346 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 GTF3AQ92664 365 aaKnown RBP13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 SPIN2AQ99865 258 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 SPIN2BQ9BPZ2 258 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 GINS3Q9BRX5 216 aa13.33□□□□□ -0.28
TNFSF13-202ENST00000349228 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 MPPED1O15442 326 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 MUC1P15941 1255 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 RCC1P18754 421 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 PRDX4Q13162 271 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 GNMTQ14749 295 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 TMEM164Q5U3C3 297 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 ZDHHC23Q8IYP9 409 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 OR5A2Q8NGI9 324 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 DYRK2Q92630 601 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 EXTL1Q92935 676 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 HIST1H2AAQ96QV6 131 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 PAPOLGQ9BWT3 736 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 STRAPQ9Y3F4 350 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 KIR2DS1A0A191URI9 304 aa13.32□□□□□ -0.28
TNFSF13-202ENST00000349228 C3orf85A0A1B0GTC6 90 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms