RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 G6PC2Q9NQR9 355 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 ZNF732B4DXR9 585 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 SULT1A2P50226 295 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 H2BFWTQ7Z2G1 175 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 LURAP1Q96LR2 239 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 HIPK2Q9H2X6 1198 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 BOD1Q96IK1 185 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 OR51I2Q9H344 312 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 VWA8A3KMH1 1905 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 AQP7P3A6NL99 342 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 SULT1A1P50225 295 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 EGLN1Q9GZT9 426 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 MYOZ1Q9NP98 299 aaPredicted RBP12.95□□□□□ -0.34
NUP50-201ENST00000347635 SEC11BP0C7V7 166 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
NUP50-201ENST00000347635 NPIPB9F8W1W9 429 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 H3BMH7 237 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 RPS2P15880 293 aaKnown RBP12.94□□□□□ -0.34
NUP50-201ENST00000347635 KITLGP21583 273 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 PTPRDP23468 1912 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 OR13D1Q8NGV5 346 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 ADIPOR1Q96A54 375 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 RASL10BQ96S79 203 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 STARD10Q9Y365 291 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 LRRC30A6NM36 301 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 OR8U8P0C7N1 319 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 ZNF32P17041 273 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 PTGER4P35408 488 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 TMEM267Q0VDI3 215 aaPredicted RBP12.94□□□□□ -0.34
NUP50-201ENST00000347635 OR10D4PQ8NGN7 298 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
NUP50-201ENST00000347635 CHST5Q9GZS9 411 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 TLNRD1Q9H1K6 362 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 PATZ1Q9HBE1 687 aaKnown RBP12.94□□□□□ -0.34
NUP50-201ENST00000347635 GNG12Q9UBI6 72 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 MBP02144 154 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 GRPP07492 148 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 GFRALQ6UXV0 394 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 WNT2BQ93097 391 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 VWCEQ96DN2 955 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 FAM206AQ9NX38 181 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 POLDIP2Q9Y2S7 368 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 CEP290O15078 2479 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 AQP10Q96PS8 301 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 GLRX2Q9NS18 164 aa12.94□□□□□ -0.34
NUP50-201ENST00000347635 URB1O60287 2271 aaKnown RBP12.93□□□□□ -0.34
NUP50-201ENST00000347635 ADAM11O75078 769 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 GABRA2P47869 451 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 LRRC75AQ8NAA5 344 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 GFI1Q99684 422 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 LANCL2Q9NS86 450 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 PLA2G3Q9NZ20 509 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 IGHMP01871 453 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 FABP4P15090 132 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 POLR2GP62487 172 aaKnown RBP eCLIP12.93□□□□□ -0.34
NUP50-201ENST00000347635 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
NUP50-201ENST00000347635 NCMAPQ5T1S8 102 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 SLC2A9Q9NRM0 540 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 SPAARA0A1B0GVQ0 90 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 SH2D1BO14796 132 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 CRYAAP02489 173 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 ARSJQ5FYB0 599 aaPredicted RBP12.93□□□□□ -0.34
NUP50-201ENST00000347635 TMEM211Q6ICI0 200 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 LYZL2Q7Z4W2 148 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 GEMIN2O14893 280 aaKnown RBP12.93□□□□□ -0.34
NUP50-201ENST00000347635 DEDDO75618 318 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 NUDT16L1Q9BRJ7 211 aaKnown RBP12.93□□□□□ -0.34
NUP50-201ENST00000347635 KCNIP2Q9NS61 270 aa12.93□□□□□ -0.34
NUP50-201ENST00000347635 PTPRZ1P23471 2315 aaPredicted RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 GAPDHP04406 335 aaKnown RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 DTYMKP23919 212 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 CD200P41217 278 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 ANKRD55Q3KP44 614 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 APOBEC3DQ96AK3 386 aaPredicted RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 MSI2Q96DH6 328 aaKnown RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 SFTPCP11686 197 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 FAM3AP98173 230 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 PABPC1L2AQ5JQF8 200 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 OR2B11Q5JQS5 317 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 HEYLQ9NQ87 328 aaPredicted RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 TRAV14DV4A0A0A6YYC5 116 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 A0A1W2PPE2 198 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 MS4A18H0YCH9 400 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 CLDN34H7C241 214 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 MPPED1O15442 326 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 SPINT2O43291 252 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 COX5AP20674 150 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 EWSR1Q01844 656 aaKnown RBP eCLIP12.92□□□□□ -0.34
NUP50-201ENST00000347635 MS4A18Q3C1V0 323 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 TBC1D26Q86UD7 250 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 C5orf66Q9H5L9 145 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 DECR2Q9NUI1 292 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms