RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 DEGS1O15121 323 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 XRCC3O43542 346 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 CHRM2P08172 466 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 SELLP14151 372 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 MUC1P15941 1255 aaPredicted RBP15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 DNASE1P24855 282 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 GABRA2P47869 451 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 TAS2R20P59543 309 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 COL10A1Q03692 680 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 MICBQ29980 383 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 NKAPLQ5M9Q1 402 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 ATAD3CQ5T2N8 411 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 C6orf201Q7Z4U5 140 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 CHST4Q8NCG5 386 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 GAFA1Q96PS6 74 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 TMEM246Q9BRR3 403 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 PECRQ9BY49 303 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 AKIP1Q9NQ31 210 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 RCC2Q9P258 522 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 MAB21L2Q9Y586 359 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 V9GYH0 126 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 TRAV38-1A0A0B4J264 116 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 A0A0G2JMP0 313 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 A0A0X1KG70 313 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A10PA6NDY2 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A18PA6NE21 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A16PA6NEW6 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A20PA6NIJ5 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A8PA6NJQ4 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A7PA6NKC0 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A22PA8MWA6 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A12PA8MX19 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A5PA8MXJ8 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A23PA8MXZ1 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 SLC33A1O00400 549 aaPredicted RBP15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 SH2D1BO14796 132 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 PSPNO60542 156 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 PDCD6O75340 191 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FCN3O75636 299 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 HLA-DQB1P01920 261 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A15PP0C7V4 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A13PP0C7W8 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A14PP0C7W9 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM90A24PP0C7X0 464 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 ZNF44P15621 663 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 GNB3P16520 340 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 DEFB113Q30KQ7 82 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 ZNF260Q3ZCT1 412 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FIP1L1Q6UN15 594 aaKnown RBP15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 LINC00596Q86U02 117 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 FGFRL1Q8N441 504 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 SUMF2Q8NBJ7 301 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 OR4M2Q8NGB6 313 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 DYRK2Q92630 601 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 GCDHQ92947 438 aaPredicted RBP15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 RAB3CQ96E17 227 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 SULT4A1Q9BR01 284 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 IFT22Q9H7X7 185 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 DIABLOQ9NR28 239 aa15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 BEX4Q9NWD9 120 aaPredicted RBP15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 MRPS7Q9Y2R9 242 aaKnown RBP15.86■□□□□ 0.13
CHMP4A-201ENST00000347519 CSMD2Q7Z408 3487 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 ANKRD17O75179 2603 aaKnown RBP15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 MFNGO00587 321 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 HSPB6O14558 160 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 INHBBP09529 407 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 FUT3P21217 361 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 LMO1P25800 156 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 ETV6P41212 452 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 PDLIM4P50479 330 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 TMEM33P57088 247 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 CDNFQ49AH0 187 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 TMEM69Q5SWH9 247 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 RAB12Q6IQ22 244 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 ZNF788Q6ZQV5 615 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 C17orf107Q6ZR85 190 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 Q6ZTK2 550 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 BPIFB2Q8N4F0 458 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 FAM216BQ8N7L0 139 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 POM121Q96HA1 1249 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 ABHD1Q96SE0 405 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 FAAP24Q9BTP7 215 aa15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 SEBOXQ9HB31 216 aaPredicted RBP15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 BARX1Q9HBU1 254 aaPredicted RBP15.85■□□□□ 0.13
CHMP4A-201ENST00000347519 A0A0A6YYH2 397 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 UBE2QL1A1L167 161 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 ISPDA4D126 451 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 FABP12A6NFH5 140 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 A6NJ64 397 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 ZNF737O75373 536 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 HIST1H1DP16402 221 aaKnown RBP15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 GIFP27352 417 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 MDH2P40926 338 aaKnown RBP15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 GPR6P46095 362 aaPredicted RBP15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 ZNF79Q15937 498 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 ATPAF1Q5TC12 328 aaPredicted RBP15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 LINC00299Q6ZSB3 139 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 ZNRF1Q8ND25 227 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 OR4S1Q8NGB4 309 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 ST8SIA4Q92187 359 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms