RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SAA4P35542 130 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 AQP4P55087 323 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 RPL15P61313 204 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 KLRD1Q13241 179 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 RIPK1Q13546 671 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 C6orf141Q5SZD1 244 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 DMKNQ6E0U4 476 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 XAF1Q6GPH4 301 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 LDLRAD3Q86YD5 345 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 PXT1Q8NFP0 134 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 OR13D1Q8NGV5 346 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 RPS4Y2Q8TD47 263 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF714Q96N38 554 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 SVEP1Q4LDE5 3571 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 DEGS1O15121 323 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 CALCBP10092 127 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 CELP19835 753 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF93P35789 620 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 DDI2Q5TDH0 399 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 GDPGP1Q6ZNW5 385 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 OR5R1Q8NH85 324 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 DYRK2Q92630 601 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 TNFRSF14Q92956 283 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 CHST6Q9GZX3 395 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 LINC00312Q9Y6C7 94 aa12.91□□□□□ -0.34
TSPAN4-201ENST00000346501 TRGV10A0A0A0MS01 117 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 IGKV1-12A0A0C4DH73 117 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 A0A1B0GUS0 222 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 TMEM82A0PJX8 343 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF780AO75290 641 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 OR2H2O95918 312 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 IGKV1D-12P01611 117 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 CDK1P06493 297 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 CCL3L1P16619 93 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 ERP29P30040 261 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 C21orf33P30042 268 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 BDH1Q02338 343 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 GPR176Q14439 515 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF273Q14593 569 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 AWAT1Q58HT5 328 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 C17orf107Q6ZR85 190 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 NANOGP1Q8N7R0 232 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 ZFP41Q8N8Y5 198 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 OR52N4Q8NGI2 321 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 OR4F5Q8NH21 305 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 RGP1Q92546 391 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 NR1H4Q96RI1 486 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 GAL3ST2Q9H3Q3 398 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 IL36RNQ9UBH0 155 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 ING4Q9UNL4 249 aa12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 SIRT4Q9Y6E7 314 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-201ENST00000346501 TRBV5-5A0A0J9YX44 114 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 FAM181BA6NEQ2 426 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 POM121CA8CG34 1229 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 C17orf98A8MV24 154 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 GABRPO00591 440 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 HTR3BO95264 441 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 LALBAP00709 142 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 CD1AP06126 327 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 COX7A1P24310 79 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 LMO1P25800 156 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 TGFBR2P37173 567 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 PTGFRP43088 359 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 IER3P46695 156 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 P2RX3P56373 397 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 ZP1P60852 638 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 RNLSQ5VYX0 342 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNF782Q6ZMW2 699 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 MS4A15Q8N5U1 240 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 OR4S1Q8NGB4 309 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 OR51A2Q8NGJ7 313 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 NRG4Q8WWG1 115 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 CHIAQ9BZP6 476 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 BEX1Q9HBH7 125 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNRD1Q9P1U0 126 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 BLOC1S6Q9UL45 172 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 UBE2J1Q9Y385 318 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 FBN3Q75N90 2809 aa12.89□□□□□ -0.35
TSPAN4-201ENST00000346501 H3BUI4 141 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 PSPNO60542 156 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 MYF6P23409 242 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 CFPP27918 469 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 DLX1P56177 255 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 IL13RA2Q14627 380 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 SPHARQ15513 63 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 MED22Q15528 200 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 OR52W1Q6IF63 320 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 LAIR2Q6ISS4 152 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 IZUMO2Q6UXV1 221 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 PNKDQ8N490 385 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNF485Q8NCK3 441 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 FOXRED1Q96CU9 486 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms