RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FDX2Q6P4F2 183 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 CRIP3Q6Q6R5 217 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 ZBTB49Q6ZSB9 765 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 TMEM219Q86XT9 240 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 DYNAPQ8N1N2 210 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 Q8N2B8 174 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 OR52N4Q8NGI2 321 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 OR51A4Q8NGJ6 313 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 OR13C9Q8NGT0 318 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
SGCA-202ENST00000344627 MALSU1Q96EH3 234 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 OR4F4Q96R69 305 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 ZCCHC4Q9H5U6 513 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 EXOSC4Q9NPD3 245 aaKnown RBP10.04□□□□□ -0.8
SGCA-202ENST00000344627 ING3Q9NXR8 418 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 EXOGQ9Y2C4 368 aaKnown RBP10.04□□□□□ -0.8
SGCA-202ENST00000344627 LINC00312Q9Y6C7 94 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 SESN1Q9Y6P5 492 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 LOC100130705A0A1B0GUX0 176 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 ERICH4A6NGS2 130 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 FAM90A8PA6NJQ4 464 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 OR4C45A6NMZ5 311 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 F2RL2O00254 374 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 MPZL2O60487 215 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 PSPNO60542 156 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 FADS2O95864 444 aaKnown RBP10.03□□□□□ -0.8
SGCA-202ENST00000344627 TMEM225BP0DP42 221 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 DBTP11182 482 aaKnown RBP10.03□□□□□ -0.8
SGCA-202ENST00000344627 ZNF44P15621 663 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 DYNLT3P51808 116 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 GBX2P52951 348 aaPredicted RBP10.03□□□□□ -0.8
SGCA-202ENST00000344627 SLC34A1Q06495 639 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 ZNF146Q15072 292 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 ZNF626Q68DY1 528 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 HIST2H2BDQ6DRA6 164 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 SATL1Q86VE3 508 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 KLHDC1Q8N7A1 406 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 TSEN15Q8WW01 171 aaKnown RBP10.03□□□□□ -0.8
SGCA-202ENST00000344627 COMMD4Q9H0A8 199 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 ISG20L2Q9H9L3 353 aaKnown RBP10.03□□□□□ -0.8
SGCA-202ENST00000344627 S100A14Q9HCY8 104 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 HMG20AQ9NP66 347 aa10.03□□□□□ -0.8
SGCA-202ENST00000344627 TRGV10A0A0A0MS01 117 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 FUOMA2VDF0 154 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 CHST1O43916 411 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 PEX14O75381 377 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 OR2H2O95918 312 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 OR3A1P47881 315 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 SPIN3Q5JUX0 258 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 PRAMEF5Q5TYX0 476 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 TCF23Q7RTU1 214 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 RNF144BQ7Z419 303 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 C1QL4Q86Z23 238 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 ZNF555Q8NEP9 628 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 OR11H6Q8NGC7 330 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 OR5AK2Q8NH90 309 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 RHOXF1Q8NHV9 184 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 PIFOQ8TCI5 191 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 NR1H4Q96RI1 486 aaPredicted RBP10.02□□□□□ -0.81
SGCA-202ENST00000344627 GPER1Q99527 375 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 SLC29A1Q99808 456 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 CLEC7AQ9BXN2 247 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 PRSS22Q9GZN4 317 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 TMEM133Q9H2Q1 129 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 SEBOXQ9HB31 216 aaPredicted RBP10.02□□□□□ -0.81
SGCA-202ENST00000344627 DHDHQ9UQ10 334 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 MYRFQ9Y2G1 1151 aa10.02□□□□□ -0.81
SGCA-202ENST00000344627 RPL36Q9Y3U8 105 aaKnown RBP10.02□□□□□ -0.81
SGCA-202ENST00000344627 IGHV2-26A0A0B4J1V2 119 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 IGKV1-12A0A0C4DH73 117 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 FAM172BPA6NC97 362 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 TMEM212A6NML5 194 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 DEGS1O15121 323 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 PIN1P1O15428 100 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 MAGEB3O15480 346 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 FBXO24O75426 580 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 IGKV1D-12P01611 117 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 MT-ND2P03891 347 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 RPSAP08865 295 aaKnown RBP10.01□□□□□ -0.81
SGCA-202ENST00000344627 CCDC159P0C7I6 412 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 JUNBP17275 347 aaPredicted RBP10.01□□□□□ -0.81
SGCA-202ENST00000344627 P2RX3P56373 397 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 AESQ08117 197 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 RAB40BQ12829 278 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 HABP2Q14520 560 aaPredicted RBP10.01□□□□□ -0.81
SGCA-202ENST00000344627 NSUN5P1Q3KNT7 163 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 KLHL22Q53GT1 634 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 KRBOX4Q5JUW0 171 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 MINOS1Q5TGZ0 78 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 LPCAT4Q643R3 524 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 LYG1Q8N1E2 194 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 SYS1Q8N2H4 156 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 PQLC1Q8N2U9 271 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 OR52I1Q8NGK6 324 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms