RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
CXCL12-201ENST00000343575 SIAH2O43255 324 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 PLATP00750 562 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 TUBG1P23258 451 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 PTAFRP25105 342 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 FABP6P51161 128 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 SORDQ00796 357 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 TMEM108Q6UXF1 575 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 C17orf107Q6ZR85 190 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 SSX8Q7RTT4 187 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF546Q86UE3 836 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 LRP11Q86VZ4 500 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 ANGPTL5Q86XS5 388 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 SVBPQ8N300 66 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 TUBG2Q9NRH3 451 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 ANKHD1Q8IWZ3 2542 aaKnown RBP12.53□□□□□ -0.4
CXCL12-201ENST00000343575 TMEM272A0A1B0GTI8 110 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 BCL2L11O43521 198 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 SPDEFO95238 335 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 RLN2P04090 185 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 NAT2P11245 290 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 AGAP20933 346 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 KITLGP21583 273 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 GLRXP35754 106 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 PLCXD3Q63HM9 321 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 OR10K2Q6IF99 312 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-201ENST00000343575 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 OR5D18Q8NGL1 313 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 GCDHQ92947 438 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-201ENST00000343575 MYEF2Q9P2K5 600 aaKnown RBP12.53□□□□□ -0.4
CXCL12-201ENST00000343575 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 MLXQ9UH92 298 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 LOC100289279A0A1B0GTE1 492 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 FAM230AA0A1W2PPH8 454 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 ATG12O94817 140 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 CLDN14O95500 239 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 VSIG8P0DPA2 414 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 CA6P23280 308 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 UNC119Q13432 240 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 CEACAM21Q3KPI0 293 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 NCMAPQ5T1S8 102 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 ATRAIDQ6UW56 229 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 UNQ6126/PRO20091Q6UXV3 157 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 Q6ZR03 302 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 OR5P3Q8WZ94 311 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 SAV1Q9H4B6 383 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-201ENST00000343575 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 BARX1Q9HBU1 254 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-201ENST00000343575 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
CXCL12-201ENST00000343575 ZMAT5Q9UDW3 170 aaKnown RBP12.52□□□□□ -0.41
CXCL12-201ENST00000343575 SIX6O95475 246 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 GTF2F2P13984 249 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 PRSS3P35030 304 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 PTGFRP43088 359 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 ALDH3B1P43353 468 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 FUT6P51993 359 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 MTCP1P56278 107 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 TAS2R19P59542 299 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 CNN3Q15417 329 aaKnown RBP12.51□□□□□ -0.41
CXCL12-201ENST00000343575 MICBQ29980 383 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 ZNF718Q3SXZ3 478 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 DMRTC2Q8IXT2 367 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-201ENST00000343575 ZDHHC23Q8IYP9 409 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 SPAG16Q8N0X2 631 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-201ENST00000343575 NUP37Q8NFH4 326 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 BPIFCQ8NFQ6 507 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 COMMD9Q9P000 198 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 RALYQ9UKM9 306 aaKnown RBP12.51□□□□□ -0.41
CXCL12-201ENST00000343575 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
CXCL12-201ENST00000343575 IGLV3-9A0A075B6K5 115 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 A0A1W2PP11 408 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 ANKRD30BLA7E2S9 258 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 SHISA9B4DS77 424 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 H0YL77 283 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 FCER2P06734 321 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 RBP2P50120 134 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 PAN3Q58A45 887 aaKnown RBP12.51□□□□□ -0.41
CXCL12-201ENST00000343575 FAAP20Q6NZ36 180 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 GLIPR1L1Q6UWM5 242 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 WDR86Q86TI4 376 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 TMEM229BQ8NBD8 167 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 OR8G5Q8NG78 346 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 BORCS8Q96FH0 119 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 TECTBQ96PL2 329 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 MPC1Q9Y5U8 109 aa12.51□□□□□ -0.41
CXCL12-201ENST00000343575 IGKV1-12A0A0C4DH73 117 aa12.5□□□□□ -0.41
CXCL12-201ENST00000343575 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-201ENST00000343575 A0A1B0GWJ7 208 aa12.5□□□□□ -0.41
CXCL12-201ENST00000343575 PCP4L1A6NKN8 68 aa12.5□□□□□ -0.41
CXCL12-201ENST00000343575 TMEM14DPA8MWL7 114 aa12.5□□□□□ -0.41
CXCL12-201ENST00000343575 MLNRO43193 412 aa12.5□□□□□ -0.41
CXCL12-201ENST00000343575 IGKV1D-12P01611 117 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms