RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 HIST1H2AAQ96QV6 131 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 PLA2G3Q9NZ20 509 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 PITPNC1Q9UKF7 332 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 PROB1E7EW31 1015 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 MBP02144 154 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 KIR2DL1P43626 348 aaPredicted RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF66Q6ZN08 573 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 DOK3Q7L591 496 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 MRPL41Q8IXM3 137 aaKnown RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 SLC22A18ASQ8N1D0 253 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 TMEM252Q8N6L7 170 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 OR5R1Q8NH85 324 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 KIAA0100Q14667 2235 aaKnown RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 NTSR1P30989 418 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 MTCP1P56278 107 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 C18orf12Q96KH6 178 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 VSIRQ9H7M9 311 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF160Q9HCG1 818 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 UBE2J1Q9Y385 318 aaPredicted RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 IGHV5-51A0A0C4DH38 117 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 MKRN2OSH3BPM6 223 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 CNOT4O95628 575 aaKnown RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 HSPB1P04792 205 aaKnown RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 SMAD4Q13485 552 aaKnown RBP12.93□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF506Q5JVG8 444 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 RSG1Q9BU20 258 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 WNT16Q9UBV4 365 aa12.93□□□□□ -0.34
CLCN1-201ENST00000343257 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.92□□□□□ -0.34
CLCN1-201ENST00000343257 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.92□□□□□ -0.34
CLCN1-201ENST00000343257 A0A1W2PQF6 199 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 ADAM20O43506 726 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 OR2J2O76002 312 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 SCGB1D1O95968 90 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 IDH3GP51553 393 aaPredicted RBP12.92□□□□□ -0.34
CLCN1-201ENST00000343257 PIGYQ3MUY2 71 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 UEVLDQ8IX04 471 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 TMEM183AQ8IXX5 376 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 OR13D1Q8NGV5 346 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 OR1P1Q8NH06 330 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 OR2AE1Q8NHA4 323 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 UNC13CQ8NB66 2214 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 A0A1B0GW64 132 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 FOXI3A8MTJ6 420 aaPredicted RBP12.92□□□□□ -0.34
CLCN1-201ENST00000343257 CEBPZOSA8MTT3 80 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 TMEM50AO95807 157 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 RPL29P47914 159 aaKnown RBP12.92□□□□□ -0.34
CLCN1-201ENST00000343257 BATFQ16520 125 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 IZUMO4Q1ZYL8 232 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 SLC35E3Q7Z769 313 aa12.92□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF814B7Z6K7 855 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 IGKV3-11P04433 115 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 AADACP22760 399 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 CLDN17P56750 224 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 HERV-K104P61576 105 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 TMEM267Q0VDI3 215 aaPredicted RBP12.91□□□□□ -0.34
CLCN1-201ENST00000343257 RTP5Q14D33 572 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 NCR3LG1Q68D85 454 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF695Q8IW36 515 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 FBRSQ9HAH7 460 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 MMACHCQ9Y4U1 282 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 ASXL3Q9C0F0 2248 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 MYBPHQ13203 477 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 NOGQ13253 232 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 FAM90A2PQ658T7 463 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 OR10A7Q8NGE5 316 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 NCOA6Q14686 2063 aaPredicted RBP12.91□□□□□ -0.34
CLCN1-201ENST00000343257 A0A1W2PPQ1 181 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 H3BMH7 237 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 CD33P20138 364 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 GNRHRP30968 328 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 PARM1Q6UWI2 310 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 OR4D5Q8NGN0 318 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 FGF14Q92915 247 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 ELOVL1Q9BW60 279 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 C8orf33Q9H7E9 229 aaPredicted RBP12.91□□□□□ -0.34
CLCN1-201ENST00000343257 COPS7AQ9UBW8 275 aa12.91□□□□□ -0.34
CLCN1-201ENST00000343257 A0A1B0GUS0 222 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 DVL1O14640 695 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 MLF1P58340 268 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 FAM189A2Q15884 450 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 BTNL3Q6UXE8 466 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF705AQ6ZN79 300 aaPredicted RBP12.9□□□□□ -0.34
CLCN1-201ENST00000343257 NOL4LQ96MY1 436 aaPredicted RBP12.9□□□□□ -0.34
CLCN1-201ENST00000343257 PLEKHF2Q9H8W4 249 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 KLHL13Q9P2N7 655 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 A0A1B0GU03 582 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
CLCN1-201ENST00000343257 CHST1O43916 411 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 EFNA2O43921 213 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 DFFBO76075 338 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 H3F3AP84243 136 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 TLE4Q04727 773 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 RTL6Q6ICC9 239 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 RPUSD4Q96CM3 377 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms