RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OR8U8P0C7N1 319 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 ZP1P60852 638 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 SNRPEP62304 92 aaKnown RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 EIF3IQ13347 325 aaKnown RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 Q8IYB0 196 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 ACTR3CQ9C0K3 210 aaPredicted RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 GPR35Q9HC97 309 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 PROCRQ9UNN8 238 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 TDRD6O60522 2096 aaKnown RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 PIGYQ3MUY2 71 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 SLC25A47Q6Q0C1 308 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 FLVCR1-AS1Q8TAF5 88 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 MPC1Q9Y5U8 109 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 IGKV3D-11A0A0A0MRZ8 115 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 DTYMKP23919 212 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 ZNF816Q0VGE8 651 aaPredicted RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 SMIM21Q3B7S5 101 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 ESRP2Q9H6T0 727 aaKnown RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 LAMP3Q9UQV4 416 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 TMEM30CPA0ZSE6 113 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 PGA4P0DJD7 388 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 ZNF429Q86V71 674 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 MAFAQ8NHW3 353 aaPredicted RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 CT55Q8WUE5 264 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 DYRK2Q92630 601 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 SPSB2Q99619 263 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 TMEM9BQ9NQ34 198 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 FAM206AQ9NX38 181 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 RGPD3A6NKT7 1758 aaPredicted RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 SCN2AQ99250 2005 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 GREB1Q4ZG55 1949 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 A0A0U1RQV5 110 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 A0A1W2PPQ1 181 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 A0A1W2PQM1 296 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 SHISA7A6NL88 538 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 DAOP14920 347 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 MEOX1P50221 254 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 RPS16P62249 146 aaKnown RBP6.29□□□□□ -1.4
VCAN-202ENST00000342785 NAAAQ02083 359 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 ENDOGQ14249 297 aaKnown RBP6.29□□□□□ -1.4
VCAN-202ENST00000342785 SSX2Q16385 188 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 ADAT1Q9BUB4 502 aaKnown RBP6.29□□□□□ -1.4
VCAN-202ENST00000342785 CHRNA10Q9GZZ6 450 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 NGBQ9NPG2 151 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 CCL28Q9NRJ3 127 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 STARD10Q9Y365 291 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 POLEQ07864 2286 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 WNK2Q9Y3S1 2297 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 CDS2O95674 445 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 METTL15P1P0C7V9 234 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 COL19A1Q14993 1142 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
VCAN-202ENST00000342785 APCDD1LQ8NCL9 501 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 H1FXQ92522 213 aaKnown RBP6.29□□□□□ -1.4
VCAN-202ENST00000342785 A0A087WV48 116 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 RPS23P62266 143 aaKnown RBP6.29□□□□□ -1.4
VCAN-202ENST00000342785 RNF212Q495C1 297 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 NHLRC3Q5JS37 347 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 RGS7BPQ6MZT1 257 aaPredicted RBP6.29□□□□□ -1.4
VCAN-202ENST00000342785 OR13G1Q8NGZ3 307 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 AQP3Q92482 292 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TVP23CQ96ET8 276 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 SLC7A10Q9NS82 523 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 POMT1Q9Y6A1 747 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TRAV17A0A0B4J275 112 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 CDRT15L2A8MXV6 281 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 PRR32B1ATL7 298 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 MBP02144 154 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 CEACAM6P40199 344 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 MLF1P58340 268 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TMEM211Q6ICI0 200 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 SKA3Q8IX90 412 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 SHISA5Q8N114 240 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 GAPTQ8N292 157 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TGIF2Q9GZN2 237 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TUBG2Q9NRH3 451 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TAAR3PQ9P1P4 343 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TRAV39A0A0B4J263 110 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 SCGB1D1O95968 90 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 BTCP35070 178 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 LTBRP36941 435 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 LPAR6P43657 344 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 ZNF273Q14593 569 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 BATFQ16520 125 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 LRRC75AQ8NAA5 344 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 NECAP1Q8NC96 275 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 OR10V1Q8NGI7 309 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 POC1BQ8TC44 478 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 HS3ST3B1Q9Y662 390 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 C7orf77A4D0Y5 90 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 GPR37O15354 613 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 HPP00738 406 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 CD74P04233 296 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 NCR3LG1Q68D85 454 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TBC1D26Q86UD7 250 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 C1orf210Q8IVY1 113 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 ISOC2Q96AB3 205 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 S1PR3Q99500 378 aa6.29□□□□□ -1.4
VCAN-202ENST00000342785 TMEM14DPA8MWL7 114 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms