RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 NEK7Q8TDX7 302 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 ZNF2Q9BSG1 426 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 LIME1Q9H400 295 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 CHMP1AQ9HD42 196 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 EDARQ9UNE0 448 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 C9orf170A2RU37 121 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 LRP5LA4QPB2 252 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 F5H5P2 479 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 MSMPQ1L6U9 139 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 ZNF718Q3SXZ3 478 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 C1QTNF12Q5T7M4 302 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 Q6ZR03 302 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 LYG2Q86SG7 212 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 C9orf62Q8N4C0 152 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 ZNF835Q9Y2P0 537 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 PIEZO1Q92508 2521 aa19.07■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A10PA6NDY2 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A18PA6NE21 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A16PA6NEW6 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A20PA6NIJ5 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A8PA6NJQ4 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A7PA6NKC0 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A22PA8MWA6 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A12PA8MX19 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A5PA8MXJ8 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A23PA8MXZ1 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A15PP0C7V4 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A13PP0C7W8 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A14PP0C7W9 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM90A24PP0C7X0 464 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 OR5H8P0DN80 308 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 GLRA1P23415 457 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 CD34P28906 385 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 FAM169BQ8N8A8 192 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 RDH5Q92781 318 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 TRAF4Q9BUZ4 470 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 ATRXP46100 2492 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 OR2A4O95047 310 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 GIPP09681 153 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 LRP11Q86VZ4 500 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 TMEM230Q96A57 120 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 OR2A7Q96R45 310 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 RTBDNQ9BSG5 229 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 WDR13Q9H1Z4 485 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 DUSP13Q9UII6 198 aa19.06■□□□□ 0.64
PDLIM2-203ENST00000339162 CCSO14618 274 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 FPR2P25090 351 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 CCKARP32238 428 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 MPV17LQ2QL34 196 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 VHLLQ6RSH7 139 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 ZNF826PQ6ZT77 177 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 ASCC1Q8N9N2 400 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 LILRB4Q8NHJ6 448 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 RCC2Q9P258 522 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 GRK1Q15835 563 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 SUMF2Q8NBJ7 301 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 PRR13Q9NZ81 148 aa19.05■□□□□ 0.64
PDLIM2-203ENST00000339162 CEACAM18A8MTB9 384 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 KITLGP21583 273 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 TMEM211Q6ICI0 200 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 RGS7BPQ6MZT1 257 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 PEG10Q86TG7 708 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 RELL2Q8NC24 303 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 ZNF286AQ9HBT8 521 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 NECAP2Q9NVZ3 263 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 OPN4Q9UHM6 478 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 ADGRG4Q8IZF6 3080 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 TRAV24A0A0B4J272 114 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 MCRIP1C9JLW8 97 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 CRYAAP02489 173 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 MPPED2Q15777 294 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 LY6G6FQ5SQ64 297 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 PRAMEF6Q5VXH4 476 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 MBNL2Q5VZF2 373 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 ZNF660Q6AZW8 331 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 KCTD9Q7L273 389 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 GTF3AQ92664 365 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 POM121Q96HA1 1249 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 PLK3Q9H4B4 646 aa19.04■□□□□ 0.64
PDLIM2-203ENST00000339162 RELNP78509 3460 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 KNG1P01042 644 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 PGAM2P15259 253 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 ZNF44P15621 663 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 RAP2BP61225 183 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 C6orf183Q5T699 404 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 MRGPRGQ86SM5 289 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 UFSP2Q9NUQ7 469 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 POLDIP2Q9Y2S7 368 aa19.03■□□□□ 0.64
PDLIM2-203ENST00000339162 ATP6V1G2-DDX39BF2Z307 99 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 TSC22D2O75157 780 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 SLC9A3R2Q15599 337 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 TMEM128Q5BJH2 165 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 IGSF11Q5DX21 431 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 FAHD2BQ6P2I3 314 aaPredicted RBP19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 FAHD2AQ96GK7 314 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 PIGMQ9H3S5 423 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 SLC23A1Q9UHI7 598 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 NOS1APO75052 506 aaPredicted RBP19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 NXPH2O95156 264 aa19.02■□□□□ 0.64
PDLIM2-203ENST00000339162 SSTR2P30874 369 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms