RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 OR10A7Q8NGE5 316 aa9.38□□□□□ -0.91
CLN8-201ENST00000331222 SIRT5Q9NXA8 310 aa9.38□□□□□ -0.91
CLN8-201ENST00000331222 HEATR1Q9H583 2144 aaKnown RBP9.37□□□□□ -0.91
CLN8-201ENST00000331222 A0A1B0GTL3 188 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 hADV38S2A0JD32 116 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 EPXP11678 715 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 IL11RAQ14626 422 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 TWIST1Q15672 202 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 ANGPTL6Q8NI99 470 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 DPH3P1Q9H4G8 78 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 FAM24AA6NFZ4 105 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 LOXL3P58215 753 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 CADM3Q8N126 398 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 FAM222BQ8WU58 562 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 COL11A1P12107 1806 aaPredicted RBP9.37□□□□□ -0.91
CLN8-201ENST00000331222 M0R3E3 92 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 TFAP2AP05549 437 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 ZNF26P17031 533 aaPredicted RBP9.37□□□□□ -0.91
CLN8-201ENST00000331222 INPP5JQ15735 1006 aaPredicted RBP9.37□□□□□ -0.91
CLN8-201ENST00000331222 CEBPEQ15744 281 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 FAM78BQ5VT40 261 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 RGPD4Q7Z3J3 1758 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 CTSVO60911 334 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 EPPINO95925 133 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 ADRA2AP08913 450 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 HLA-GP17693 338 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 BAK1Q16611 211 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 TRAV38-1A0A0B4J264 116 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 FUCA1P04066 466 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 PPOXP50336 477 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 ZNF485Q8NCK3 441 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 SYT11Q9BT88 431 aa9.37□□□□□ -0.91
CLN8-201ENST00000331222 GSTZ1O43708 216 aaPredicted RBP9.36□□□□□ -0.91
CLN8-201ENST00000331222 CEACAM3P40198 252 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 GZMKP49863 264 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 AESQ08117 197 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 WDR13Q9H1Z4 485 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 FKBP11Q9NYL4 201 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 THYN1Q9P016 225 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 CHD5Q8TDI0 1954 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 TMEM129A0AVI4 362 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 CDIPTO14735 213 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 ZNF441Q8N8Z8 693 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 MAP6Q96JE9 813 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 GPX7Q96SL4 187 aaPredicted RBP9.36□□□□□ -0.91
CLN8-201ENST00000331222 PLEKHA2Q9HB19 425 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 DOCK3Q8IZD9 2030 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 MBTPS2O43462 519 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 OR4D9Q8NGE8 314 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 ADAMTS17Q8TE56 1095 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 C12orf57Q99622 126 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 LHX9Q9NQ69 397 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 TINAGQ9UJW2 476 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 ADAMTSL3P82987 1691 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 FBLL1A6NHQ2 334 aaKnown RBP9.36□□□□□ -0.91
CLN8-201ENST00000331222 B3GNT9Q6UX72 402 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 DND1Q8IYX4 353 aaKnown RBP9.36□□□□□ -0.91
CLN8-201ENST00000331222 OR4P4Q8NGL7 312 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 OTOSQ8NHW6 89 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 CT62P0C5K7 136 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
CLN8-201ENST00000331222 IGFBP7Q16270 282 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 FAM26EQ8N5C1 309 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 OR10AC1Q8NH08 325 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 ZG16BQ96DA0 208 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 FOXC2Q99958 501 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.36□□□□□ -0.91
CLN8-201ENST00000331222 BRS3P32247 399 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 PAFAH1B2P68402 229 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 B4GALNT1Q00973 533 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 MVB12AQ96EY5 273 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 IL21Q9HBE4 155 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 MMP24Q9Y5R2 645 aa9.36□□□□□ -0.91
CLN8-201ENST00000331222 OR5B21A6NL26 309 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 NAT2P11245 290 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 SELENOPP49908 381 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 ROM1Q03395 351 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLN8-201ENST00000331222 PSG5Q15238 335 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 PHYHIPQ92561 330 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 C10orf90Q96M02 699 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 TBX19O60806 448 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 TP53I13Q8NBR0 393 aaPredicted RBP9.35□□□□□ -0.91
CLN8-201ENST00000331222 FAM210BQ96KR6 192 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 UBE2L3P68036 154 aaKnown RBP9.35□□□□□ -0.91
CLN8-201ENST00000331222 PRICKLE4Q2TBC4 344 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 NT5CQ8TCD5 201 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 ASB13Q8WXK3 278 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 FLRT3Q9NZU0 649 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 J3QR89 54 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 DHRS3O75911 302 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 MELTFP08582 738 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 ISL1P61371 349 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 FUT7Q11130 342 aa9.35□□□□□ -0.91
CLN8-201ENST00000331222 SSX1Q16384 188 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms