RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 NFYBP25208 207 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 CTAG1AP78358 180 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 CCL8P80075 99 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 PIGYQ3MUY2 71 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 KRTCAP3Q53RY4 240 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 OR2W3Q7Z3T1 314 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 CSNK2A3Q8NEV1 391 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 ETV2O00321 342 aaPredicted RBP13.7□□□□□ -0.22
PDGFB-201ENST00000331163 SLC17A2O00624 439 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 ZG16O60844 167 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 S100A9P06702 114 aaKnown RBP13.7□□□□□ -0.22
PDGFB-201ENST00000331163 S100A6P06703 90 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 SPP1P10451 314 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 KLRB1Q12918 225 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 RIPPLY2Q5TAB7 128 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 PRAMEF6Q5VXH4 476 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 Q6ZT83 130 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 C12orf45Q8N5I9 185 aaPredicted RBP13.7□□□□□ -0.22
PDGFB-201ENST00000331163 STARD4Q96DR4 205 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 GFI1Q99684 422 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 ST3GAL6Q9Y274 331 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 USP9XQ93008 2570 aaPredicted RBP13.7□□□□□ -0.22
PDGFB-201ENST00000331163 C5orf51A6NDU8 294 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 LINC00587B1AMM8 73 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 GSTZ1O43708 216 aaPredicted RBP13.7□□□□□ -0.22
PDGFB-201ENST00000331163 SYNGR3O43761 229 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 ZNF16P17020 682 aaPredicted RBP13.7□□□□□ -0.22
PDGFB-201ENST00000331163 SPIN3Q5JUX0 258 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 ADGRE4PQ86SQ3 457 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 OR10R2Q8NGX6 335 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 LYZL4Q96KX0 146 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 BCO1Q9HAY6 547 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 PURGQ9UJV8 347 aaKnown RBP13.7□□□□□ -0.22
PDGFB-201ENST00000331163 PCSK5Q92824 1860 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 TRBV23-1A0A0A0MS06 115 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 AKR1C4P17516 323 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 RAB13P51153 203 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 LDLRAD3Q86YD5 345 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 HDHD3Q9BSH5 251 aaPredicted RBP13.69□□□□□ -0.22
PDGFB-201ENST00000331163 FAM96BQ9Y3D0 163 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 C16orf97H3BN30 126 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 SULT1C2O00338 296 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 TXNL1O43396 289 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 CECR9P0C854 216 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 PTGFRP43088 359 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
PDGFB-201ENST00000331163 ZDHHC23Q8IYP9 409 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 FAM57AQ8TBR7 257 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 ARHGAP5-AS1Q96IT6 56 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 METTL9Q9H1A3 318 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 HRH4Q9H3N8 390 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 NIT2Q9NQR4 276 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 ZNF816-ZNF321PA0A0X1KG74 233 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 OR5H14A6NHG9 310 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 ZNF724A8MTY0 619 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 OR2A4O95047 310 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 SNRPEP62304 92 aaKnown RBP13.69□□□□□ -0.22
PDGFB-201ENST00000331163 TEX30Q5JUR7 227 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 FAM209BQ5JX69 171 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 EMG1Q92979 244 aaKnown RBP13.69□□□□□ -0.22
PDGFB-201ENST00000331163 OR2A7Q96R45 310 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 FAAP24Q9BTP7 215 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 TMPRSS13Q9BYE2 586 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 BIN3Q9NQY0 253 aa13.69□□□□□ -0.22
PDGFB-201ENST00000331163 MEOX2P50222 304 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 CCDC36Q8IYA8 594 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 THRSPQ92748 146 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 A0A0B4J2A0 478 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 A0A1B0GTI1 187 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 SNRPGP15A8MWD9 76 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 RAB3DO95716 219 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 NPBWR2P48146 333 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 PDZK1IP1Q13113 114 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 RNASE10Q5GAN6 216 aaKnown RBP13.68□□□□□ -0.22
PDGFB-201ENST00000331163 TPRX1Q8N7U7 411 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 TINAGL1Q9GZM7 467 aaPredicted RBP13.68□□□□□ -0.22
PDGFB-201ENST00000331163 MOB1AQ9H8S9 216 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 SHPKQ9UHJ6 478 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 MRPS18CQ9Y3D5 142 aaKnown RBP13.68□□□□□ -0.22
PDGFB-201ENST00000331163 FAM215AQ9Y5M1 114 aa13.68□□□□□ -0.22
PDGFB-201ENST00000331163 A0A0G2JNJ9 132 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 HLA-AP01891 365 aaKnown RBP13.67□□□□□ -0.22
PDGFB-201ENST00000331163 CTSSP25774 331 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 CEBPDP49716 269 aaPredicted RBP13.67□□□□□ -0.22
PDGFB-201ENST00000331163 HFEQ30201 348 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 ZNF718Q3SXZ3 478 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 FAM201AQ5SY85 155 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 OR6K3Q8NGY3 331 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 IL36RNQ9UBH0 155 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 Q9UFV3 132 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 TMEM82A0PJX8 343 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 XRCC2O43543 280 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 CD34P28906 385 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 UQCRFS1P47985 274 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 SRSF3P84103 164 aaKnown RBP13.67□□□□□ -0.22
PDGFB-201ENST00000331163 FAM3AP98173 230 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 CHRFAM7AQ494W8 412 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 NSUN5P2Q63ZY6 315 aa13.67□□□□□ -0.22
PDGFB-201ENST00000331163 ZNF474Q6S9Z5 364 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms