RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 C9orf50Q5SZB4 431 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 TMEM123Q8N131 208 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 SLC2A9Q9NRM0 540 aa21.21■□□□□ 0.99
SOX1-201ENST00000330949 TP53I11O14683 189 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 NFATC4Q14934 902 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 KISS1Q15726 138 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 PLEKHJ1Q9NW61 149 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 WISP1O95388 367 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 CDS2O95674 445 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 P2RY6Q15077 328 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 OR5L1Q8NGL2 311 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 LIME1Q9H400 295 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 LYRM2Q9NU23 88 aaPredicted RBP21.2■□□□□ 0.98
SOX1-201ENST00000330949 WDFY3Q8IZQ1 3526 aa21.2■□□□□ 0.98
SOX1-201ENST00000330949 ZNF850A8MQ14 1090 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 ZNF17P17021 662 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 MRPS11P82912 194 aaKnown RBP21.19■□□□□ 0.98
SOX1-201ENST00000330949 ZNF774Q6NX45 483 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 C6orf201Q7Z4U5 140 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 C1QL2Q7Z5L3 287 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 MAML2Q8IZL2 1156 aaPredicted RBP21.19■□□□□ 0.98
SOX1-201ENST00000330949 TMEM252Q8N6L7 170 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 OR8B12Q8NGG6 310 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 ADAMTS18Q8TE60 1221 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 DTD1Q8TEA8 209 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 FAM221AA4D161 298 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 BCL2P10415 239 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 PHLDA2Q53GA4 152 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 H1FOOQ8IZA3 346 aaPredicted RBP21.19■□□□□ 0.98
SOX1-201ENST00000330949 TSLPQ969D9 159 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 B3GALT1Q9Y5Z6 326 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 IGKV1-9A0A0C4DH69 117 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 GLI4P10075 376 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 NKX2-1P43699 371 aaPredicted RBP21.19■□□□□ 0.98
SOX1-201ENST00000330949 ZNF133P52736 654 aaPredicted RBP21.19■□□□□ 0.98
SOX1-201ENST00000330949 CLN3Q13286 438 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 EIF3IQ13347 325 aaKnown RBP21.19■□□□□ 0.98
SOX1-201ENST00000330949 TMEM170AQ8WVE7 144 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 NKX2-4Q9H2Z4 354 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 NXT1Q9UKK6 140 aaKnown RBP21.19■□□□□ 0.98
SOX1-201ENST00000330949 LAMP3Q9UQV4 416 aa21.19■□□□□ 0.98
SOX1-201ENST00000330949 C17orf105B2RV13 164 aa21.18■□□□□ 0.98
SOX1-201ENST00000330949 EN2P19622 333 aaPredicted RBP21.18■□□□□ 0.98
SOX1-201ENST00000330949 DOK3Q7L591 496 aa21.18■□□□□ 0.98
SOX1-201ENST00000330949 A6NCN8 305 aa21.18■□□□□ 0.98
SOX1-201ENST00000330949 PFN1P07737 140 aaKnown RBP21.18■□□□□ 0.98
SOX1-201ENST00000330949 RPL29P47914 159 aaKnown RBP21.18■□□□□ 0.98
SOX1-201ENST00000330949 FAM3BP58499 235 aaPredicted RBP21.18■□□□□ 0.98
SOX1-201ENST00000330949 RUNX1Q01196 453 aa21.18■□□□□ 0.98
SOX1-201ENST00000330949 OOSP2Q86WS3 158 aa21.18■□□□□ 0.98
SOX1-201ENST00000330949 PRR22Q8IZ63 422 aa21.18■□□□□ 0.98
SOX1-201ENST00000330949 C17orf51A8MQB3 221 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 PHF1O43189 567 aaPredicted RBP21.17■□□□□ 0.98
SOX1-201ENST00000330949 SCGB1D1O95968 90 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 MSX1P28360 303 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 IDH3GP51553 393 aaPredicted RBP21.17■□□□□ 0.98
SOX1-201ENST00000330949 FXYD4P59646 89 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 VAMP2P63027 116 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 Q6ZSR6 202 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 OR2AJ1Q8NGZ0 328 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 P2RX4Q99571 388 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 HDHD3Q9BSH5 251 aaPredicted RBP21.17■□□□□ 0.98
SOX1-201ENST00000330949 TPSD1Q9BZJ3 242 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 FKBP11Q9NYL4 201 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 PCNX3Q9H6A9 2034 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 ZFP92A6NM28 416 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 MS4A18H0YCH9 400 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 CCL1P22362 96 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 BAXQ07812 192 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 MS4A18Q3C1V0 323 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 GRINAQ7Z429 371 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 C17orf78Q8N4C9 275 aa21.17■□□□□ 0.98
SOX1-201ENST00000330949 FRG2CA6NGY1 282 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 DYNLT3P51808 116 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 HSD17B7P56937 341 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 ZNF121P58317 390 aaPredicted RBP21.16■□□□□ 0.98
SOX1-201ENST00000330949 ZP4Q12836 540 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 CPEB2Q7Z5Q1 589 aaKnown RBP21.16■□□□□ 0.98
SOX1-201ENST00000330949 EPOPA6NHQ4 379 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 PROB1E7EW31 1015 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 EDN3P14138 238 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 IL12BP29460 328 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 ACOT6Q3I5F7 207 aaPredicted RBP21.16■□□□□ 0.98
SOX1-201ENST00000330949 THEM4Q5T1C6 240 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 OR13H1Q8NG92 308 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 SLC37A2Q8TED4 501 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 GLRX2Q9NS18 164 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 POLR1DQ9Y2S0 133 aa21.16■□□□□ 0.98
SOX1-201ENST00000330949 CNTRLQ7Z7A1 2325 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 NPIPB13A6NJU9 1138 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 NPIPB4C9JG80 1138 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 ONECUT2O95948 504 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 CCDC71LQ8N9Z2 235 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 MRGPRX1Q96LB2 322 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 ELL3Q9HB65 397 aaPredicted RBP21.15■□□□□ 0.98
SOX1-201ENST00000330949 SEMA5BQ9P283 1151 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 POLR3KQ9Y2Y1 108 aaPredicted RBP21.15■□□□□ 0.98
SOX1-201ENST00000330949 B4E171 279 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 TUBG1P23258 451 aa21.15■□□□□ 0.98
SOX1-201ENST00000330949 TSPAN7P41732 249 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms