RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SPEM2Q0P670 501 aa9.62□□□□□ -0.87
SNRNP200-201ENST00000323853 LGALSLQ3ZCW2 172 aaPredicted RBP9.62□□□□□ -0.87
SNRNP200-201ENST00000323853 NCBP2LA6PVI3 153 aaKnown RBP9.62□□□□□ -0.87
SNRNP200-201ENST00000323853 CRHP06850 196 aa9.62□□□□□ -0.87
SNRNP200-201ENST00000323853 OR2T6Q8NHC8 308 aa9.62□□□□□ -0.87
SNRNP200-201ENST00000323853 PARD6AQ9NPB6 346 aa9.62□□□□□ -0.87
SNRNP200-201ENST00000323853 KLK13Q9UKR3 277 aa9.62□□□□□ -0.87
SNRNP200-201ENST00000323853 OR3A1P47881 315 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 GNG4P50150 75 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 Q56UQ5 140 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 RNF133Q8WVZ7 376 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 MANBALQ9NQG1 85 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 OR2M5A3KFT3 312 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 CLDN34H7C241 214 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 PRSS12P56730 875 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 LIAT1Q6ZQX7 453 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 TUSC5Q8IXB3 177 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 NTMQ9P121 344 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 COL19A1Q14993 1142 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 PRSS53Q2L4Q9 553 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 OR2Y1Q8NGV0 311 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 SP7Q8TDD2 431 aaPredicted RBP9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 IFT22Q9H7X7 185 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 COL13A1Q5TAT6 717 aaPredicted RBP9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 OR2I1PQ8NGU4 316 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 FBLIM1Q8WUP2 373 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 PRSS27Q9BQR3 290 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 SLC25A22Q9H936 323 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 GPR35Q9HC97 309 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 TCFL5Q9UL49 500 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 RNF24Q9Y225 148 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 VSIG4Q9Y279 399 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 ERGP11308 486 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 GABRA1P14867 456 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 EFNB2P52799 333 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 POLR2GP62487 172 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 LINC00596Q86U02 117 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 FAM24BQ8N5W8 94 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 RFLNBQ8N5W9 214 aa9.61□□□□□ -0.87
SNRNP200-201ENST00000323853 HAND1O96004 215 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 TMIGD3P0DMS9 266 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 KIR3DL2P43630 455 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 TSPO2Q5TGU0 170 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 ZNF66Q6ZN08 573 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 STPG2Q8N412 459 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 WDR61Q9GZS3 305 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 LINC00862A6NCI5 91 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 FOXS1O43638 330 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 HPXP02790 462 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 PMCHP20382 165 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 MAGEA5P43359 124 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 RHOBP62745 196 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 FOXC1Q12948 553 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 KHDC1LQ5JSQ8 128 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 KLHDC1Q8N7A1 406 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 DEFB124Q8NES8 71 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 VAMP8Q9BV40 100 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 WDR13Q9H1Z4 485 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 AAMDCQ9H7C9 122 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 GPR27Q9NS67 375 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 NUP205Q92621 2012 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 ZNF785A8K8V0 405 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 PMELP40967 661 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 HLA-DRB3P79483 266 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 OR6S1Q8NH40 331 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 RFESDQ8TAC1 157 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 IGKV1-8A0A0C4DH67 115 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 SOX15O60248 233 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 SP1P08047 785 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 ZNF154Q13106 437 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 GAPTQ8N292 157 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 GPR87Q9BY21 358 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 NAT8Q9UHE5 227 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 OPN4Q9UHM6 478 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 AMMECR1Q9Y4X0 333 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 YTHDF2Q9Y5A9 579 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 SIRT4Q9Y6E7 314 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 MYO10Q9HD67 2058 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 ZP4Q12836 540 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 CLPPQ16740 277 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 RNF151Q2KHN1 245 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 OR4F17Q8NGA8 305 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 NOL4LQ96MY1 436 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 A0A1W2PQF6 199 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 LRRC3CA6NJW4 275 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 KLK10O43240 276 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 ACTL6AO96019 429 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 CCL3P10147 92 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 IL9P15248 144 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 LIMS1P48059 325 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 FOXO1Q12778 655 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 C3AR1Q16581 482 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 HES3Q5TGS1 186 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 NHLRC2Q8NBF2 726 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 SLC26A10Q8NG04 563 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 OR1L4Q8NGR5 311 aa9.6□□□□□ -0.87
SNRNP200-201ENST00000323853 CA10Q9NS85 328 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms