RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MALLQ13021 153 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 SHBQ15464 509 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 NCR3LG1Q68D85 454 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 SP5Q6BEB4 398 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 OR4X1Q8NH49 305 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 OR2V1Q8NHB1 315 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ADGRG7Q96K78 797 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 SMIM7Q9BQ49 75 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 OR14J1Q9UGF5 321 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF17P17021 662 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 CCL20P78556 96 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 MRPS21P82921 87 aaKnown RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ENDOGQ14249 297 aaKnown RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 SP6Q3SY56 376 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF343Q6P1L6 599 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 MISP3Q96FF7 219 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 RARRES2Q99969 163 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 TPSD1Q9BZJ3 242 aa4.17□□□□□ -1.74
PTPN13-201ENST00000316707 NXT1Q9UKK6 140 aaKnown RBP4.17□□□□□ -1.74
PTPN13-201ENST00000316707 IGSF23A1L1A6 192 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 H0Y8X5 98 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 DHHO43323 396 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PPYP01298 95 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 LINC00614P0C842 121 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 CD99P14209 185 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 CLDN15P56746 228 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 FXYD4P59646 89 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 SRSF7Q16629 238 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 DEFB115Q30KQ5 88 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 C10orf128Q5T292 105 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 LANCL3Q6ZV70 420 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MAML2Q8IZL2 1156 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 NAXEQ8NCW5 288 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MAGT1Q9H0U3 335 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 DUSP15Q9H1R2 295 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GOLT1BQ9Y3E0 138 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 A0A1B0GV50 99 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 AMBPP02760 352 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 SERPINE2P07093 398 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GZMBP10144 247 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MRPS34P82930 218 aaKnown RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PDZD11Q5EBL8 140 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 SLC25A53Q5H9E4 307 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF66Q6ZN08 573 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 ARL6IP6Q8N6S5 226 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 VN1R1Q9GZP7 353 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PLK3Q9H4B4 646 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF442Q9H7R0 627 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 LAMP3Q9UQV4 416 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 C5orf67F2Z3F1 127 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 M0R135 149 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 RER1O15258 196 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 KBTBD11O94819 623 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 CST2P09228 141 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 NDUFB7P17568 137 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 KLK2P20151 261 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 EPHA1P21709 976 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A2PQ658T7 463 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MEX3BQ6ZN04 569 aaKnown RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GPR137CQ8N3F9 429 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 C12orf76Q8N812 135 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OR51G1Q8NGK1 321 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OR5L1Q8NGL2 311 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM170AQ8WVE7 144 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PATE1Q8WXA2 126 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 LHX4Q969G2 390 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 KLHDC7BQ96G42 594 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 BSCL2Q96G97 398 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF799Q96GE5 643 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 AGMATQ9BSE5 352 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 SLC2A4RGQ9NR83 387 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PRSS50Q9UI38 385 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GAB2Q9UQC2 676 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 ALPK2Q86TB3 2170 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 XKRY2A2RUG3 117 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 KLF8O95600 359 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PFN1P07737 140 aaKnown RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GNRHRP30968 328 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OTX1P32242 354 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GAGE1Q13065 139 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OR2T10Q8NGZ9 312 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 SH3BGRL3Q9H299 93 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OR51I2Q9H344 312 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MCTS1Q9ULC4 181 aaKnown RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PIGLQ9Y2B2 252 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 KIAA1671Q9BY89 1806 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 CEBPZOSA8MTT3 80 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 TP53I11O14683 189 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 IGLV3-1P01715 115 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 ACRP10323 421 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 FBLP22087 321 aaKnown RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OMGP23515 440 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OR10J1P30954 320 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OPRM1P35372 400 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 HIST1H3AP68431 136 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MEF2BQ02080 365 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PHLDA2Q53GA4 152 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 LHFPL2Q6ZUX7 228 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 P4HA3Q7Z4N8 544 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms