RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 FOXG1P55316 489 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 S100A12P80511 92 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 NKAIN1Q4KMZ8 207 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 GGNBP1Q5YKI7 109 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 C6orf201Q7Z4U5 140 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 KRT77Q7Z794 578 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF433Q8N7K0 673 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF248Q8NDW4 579 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 CLDND2Q8NHS1 167 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 INTS12Q96CB8 462 aaKnown RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 DDIT4LQ96D03 193 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 SEC22AQ96IW7 307 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 LYRM2Q9NU23 88 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 MRPS28Q9Y2Q9 187 aaKnown RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 NCOR1O75376 2440 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 MLNRO43193 412 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 CFIP05156 583 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 GP1BBP13224 206 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF16P17020 682 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 NPPCP23582 126 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 CBX5P45973 191 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 DVL1P1P54792 670 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TMEM33P57088 247 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TAS2R31P59538 309 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 ERVFRD-1P60508 538 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 NSDHLQ15738 373 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TMEM211Q6ICI0 200 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 KCTD9Q7L273 389 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 CD163Q86VB7 1156 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 H1FOOQ8IZA3 346 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 SEMA6DQ8NFY4 1073 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 CPT1CQ8TCG5 803 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 ABHD5Q8WTS1 349 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 METTL21AQ8WXB1 218 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 SPACA5Q96QH8 159 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 RHOFQ9HBH0 211 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF629Q9UEG4 869 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 OR14J1Q9UGF5 321 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 EDARQ9UNE0 448 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TNFRSF13BO14836 293 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TXNL1O43396 289 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 IFNA2P01563 188 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 HCKP08631 526 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 SRP19P09132 144 aaKnown RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 PDZK1IP1Q13113 114 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TBR1Q16650 682 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 BSXQ3C1V8 233 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 LIAT1Q6ZQX7 453 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TMEM144Q7Z5S9 345 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 CA5BP1Q8WTZ4 195 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 FBXL17Q9UF56 701 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 MMP9P14780 707 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 DLSTP36957 453 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 NPY4RP50391 375 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 DSCR4P56555 118 aaPredicted RBP6.61□□□□□ -1.35
CNOT4-201ENST00000315544 RAC1P63000 192 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 RAB35Q15286 201 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF818PQ6ZRF7 136 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 PLXDC1Q8IUK5 500 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 ZCCHC14Q8WYQ9 949 aaKnown RBP6.61□□□□□ -1.35
CNOT4-201ENST00000315544 SPSB1Q96BD6 273 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 OR8D2Q9GZM6 311 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 EXO5Q9H790 373 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 NAA60Q9H7X0 242 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 PNO1Q9NRX1 252 aaKnown RBP6.61□□□□□ -1.35
CNOT4-201ENST00000315544 TP53TG3Q9ULZ0 132 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 PSMB11A5LHX3 300 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 SLC22A20A6NK97 555 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 RHPN2P1A8MT19 583 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 CXCL1P09341 107 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 SLC2A1P11166 492 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 CXCR1P25024 350 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 ECI1P42126 302 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 TMPRSS3P57727 454 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 DHRS13Q6UX07 377 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 RBMS3Q6XE24 437 aaKnown RBP6.61□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF843Q8N446 348 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 MEGF10Q96KG7 1140 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 PHB2Q99623 299 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 OR2H1Q9GZK4 316 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF703Q9H7S9 590 aaPredicted RBP6.61□□□□□ -1.35
CNOT4-201ENST00000315544 IL36RNQ9UBH0 155 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 F5P12259 2224 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 PIEZO1Q92508 2521 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 A0A1W2PNR3 127 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 RNASEK-C17orf49H0YIS7 233 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 FAUP35544 74 aaKnown RBP6.61□□□□□ -1.35
CNOT4-201ENST00000315544 IL13RA1P78552 427 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF506Q5JVG8 444 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 FAM220AQ7Z4H9 259 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 Q8N976 141 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 RNF141Q8WVD5 230 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 DDB2Q92466 427 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 RAB3CQ96E17 227 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 CLCC1Q96S66 551 aa6.61□□□□□ -1.35
CNOT4-201ENST00000315544 MRPS7Q9Y2R9 242 aaKnown RBP6.61□□□□□ -1.35
CNOT4-201ENST00000315544 FCN1O00602 326 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 ARG1P05089 322 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 SFTA3P0C7M3 94 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 OPRM1P35372 400 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms