RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CTRB1P17538 263 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 ACAA2P42765 397 aaKnown RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 P2RY6Q15077 328 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 CTRB2Q6GPI1 263 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 NIPSNAP3BQ9BS92 247 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 AAMDCQ9H7C9 122 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 C1RLQ9NZP8 487 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 CENPVL1A0A0U1RR11 272 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 HIST1H1DP16402 221 aaKnown RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 MRPS11P82912 194 aaKnown RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 ZNF239Q16600 458 aaKnown RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 HAGHQ16775 308 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 OR4F5Q8NH21 305 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 ANGPTL4Q9BY76 406 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 ZNF724A8MTY0 619 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 EVX1P49640 407 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 OR52L2PQ8NGH6 319 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 LRRC3CA6NJW4 275 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 S100A11P31949 105 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 TMEM267Q0VDI3 215 aaPredicted RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 RPL7L1Q6DKI1 246 aaKnown RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 OR8D4Q8NGM9 314 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 WNT2BQ93097 391 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 PERPQ96FX8 193 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 SLC7A10Q9NS82 523 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 NAGKQ9UJ70 344 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 NPTNQ9Y639 398 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 OOEPA6NGQ2 149 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
RFFL-201ENST00000315249 HILPDAQ9Y5L2 63 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 E5RGE8 158 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 CST7O76096 145 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 PDGFAP04085 211 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 FPR2P25090 351 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 UCP2P55851 309 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 LYSMD2Q8IV50 215 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 CDH26Q8IXH8 852 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 OR2V2Q96R30 315 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 NSG2Q9Y328 171 aa11.85□□□□□ -0.51
RFFL-201ENST00000315249 RPS10P46783 165 aaKnown RBP11.84□□□□□ -0.51
RFFL-201ENST00000315249 AESQ08117 197 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 ECSCRQ19T08 205 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 OR52B4Q8NGK2 314 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 TERB2Q8NHR7 220 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 SLC35D1Q9NTN3 355 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 A0A1W2PN81 502 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 GEMIN2O14893 280 aaKnown RBP11.84□□□□□ -0.51
RFFL-201ENST00000315249 CHRNA7P36544 502 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 COL19A1Q14993 1142 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 NSUN5P2Q63ZY6 315 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 ZNF439Q8NDP4 499 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 SLC25A22Q9H936 323 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 TSPAN2O60636 221 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 SEMA7AO75326 666 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 REG1BP48304 166 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 YIPF5Q969M3 257 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 RCL1Q9Y2P8 373 aaKnown RBP11.84□□□□□ -0.51
RFFL-201ENST00000315249 BGLAPP02818 100 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 FGF2P09038 288 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 C21orf58P58505 322 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 CD276Q5ZPR3 534 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 SSX7Q7RTT5 188 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 OR2W3Q7Z3T1 314 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 PLPP2O43688 288 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 SSX8Q7RTT4 187 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 OR5H6Q8NGV6 325 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 SNAPINO95295 136 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 PTBP1P26599 531 aaKnown RBP eCLIP11.84□□□□□ -0.511e-6■■■■□ 21.1
RFFL-201ENST00000315249 PSMB6P28072 239 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 KCNK15Q9H427 330 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 DOK5Q9P104 306 aa11.84□□□□□ -0.51
RFFL-201ENST00000315249 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
RFFL-201ENST00000315249 MRM2Q9UI43 246 aaKnown RBP11.83□□□□□ -0.52
RFFL-201ENST00000315249 SLC25A4P12235 298 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 PCOLCEQ15113 449 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 ZNF260Q3ZCT1 412 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 GRAMD2BQ96HH9 432 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 ZNF385DQ9H6B1 395 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 DNPH1O43598 174 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
RFFL-201ENST00000315249 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 ST3GAL2Q16842 350 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 TGIF2LXQ8IUE1 241 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 TMEM123Q8N131 208 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 SAV1Q9H4B6 383 aaPredicted RBP11.83□□□□□ -0.52
RFFL-201ENST00000315249 TRAV39A0A0B4J263 110 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 TMEM229BQ8NBD8 167 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 OR5R1Q8NH85 324 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 RPS4XP62701 263 aaKnown RBP11.83□□□□□ -0.52
RFFL-201ENST00000315249 PLAC9Q5JTB6 97 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 OR5M8Q8NGP6 311 aa11.83□□□□□ -0.52
RFFL-201ENST00000315249 ETFRF1Q6IPR1 90 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 MAP6Q96JE9 813 aa11.82□□□□□ -0.52
RFFL-201ENST00000315249 SIGLEC12Q96PQ1 595 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms