RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 NOVA1P51513 510 aaKnown RBP11.67□□□□□ -0.54
SKA3-202ENST00000314759 HIST1H3AP68431 136 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 H3F3AP84243 136 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 C10orf128Q5T292 105 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 HIST2H3PS2Q5TEC6 136 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 PLEK2Q9NYT0 353 aa11.67□□□□□ -0.54
SKA3-202ENST00000314759 IGHV3-15A0A0B4J1V0 119 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 CDRT15L2A8MXV6 281 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 TRGC2P03986 189 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 GLB1P16278 677 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 PRAMEF20Q5VT98 475 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 KMT5CQ86Y97 462 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 LGI3Q8N145 548 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 RBM24Q9BX46 236 aaKnown RBP11.66□□□□□ -0.54
SKA3-202ENST00000314759 ANGPTL4Q9BY76 406 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 A0A1B0GW64 132 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 GEMIN2O14893 280 aaKnown RBP11.66□□□□□ -0.54
SKA3-202ENST00000314759 ZFAND5O76080 213 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 F10P00742 488 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 SLC22A25Q6T423 547 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 OR4D5Q8NGN0 318 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 TMEM54Q969K7 222 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 SMOC1Q9H4F8 434 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 PHF1O43189 567 aaPredicted RBP11.66□□□□□ -0.54
SKA3-202ENST00000314759 PNLIPP16233 465 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 EWSR1Q01844 656 aaKnown RBP eCLIP11.66□□□□□ -0.54
SKA3-202ENST00000314759 ZNF124Q15973 351 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 PIGYQ3MUY2 71 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 FOXL2NBQ6ZUU3 175 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 CPEB2Q7Z5Q1 589 aaKnown RBP11.66□□□□□ -0.54
SKA3-202ENST00000314759 HIST3H2BBQ8N257 126 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 SLC25A45Q8N413 288 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 FADS6Q8N9I5 356 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 LFNGQ8NES3 379 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 OR10AD1Q8NGE0 317 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 ZNF837Q96EG3 531 aaPredicted RBP11.66□□□□□ -0.54
SKA3-202ENST00000314759 BOD1Q96IK1 185 aa11.66□□□□□ -0.54
SKA3-202ENST00000314759 HSD17B6O14756 317 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 BCAT2O15382 392 aaPredicted RBP11.65□□□□□ -0.54
SKA3-202ENST00000314759 DHHO43323 396 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 WDR74Q6RFH5 385 aaPredicted RBP11.65□□□□□ -0.54
SKA3-202ENST00000314759 FIP1L1Q6UN15 594 aaKnown RBP11.65□□□□□ -0.54
SKA3-202ENST00000314759 RABEPKQ7Z6M1 372 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 SMRP1Q8NCR6 262 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 NAXEQ8NCW5 288 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 SPSB1Q96BD6 273 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 SPACA9Q96E40 222 aaPredicted RBP11.65□□□□□ -0.54
SKA3-202ENST00000314759 TP53RKQ96S44 253 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 RASL10BQ96S79 203 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 EML6Q6ZMW3 1958 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 RBFOX3A6NFN3 312 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 FAM24AA6NFZ4 105 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 SEC14L6B5MCN3 397 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 CYB5BO43169 146 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 NR2C1P13056 603 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 DDTP30046 118 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 UBE2KP61086 200 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 RND3P61587 244 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 DLK1P80370 383 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 GNMTQ14749 295 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 SHBQ15464 509 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 MEX3BQ6ZN04 569 aaKnown RBP11.65□□□□□ -0.54
SKA3-202ENST00000314759 Q6ZPA2 131 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 SYT3Q9BQG1 590 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 MTCH2Q9Y6C9 303 aa11.65□□□□□ -0.54
SKA3-202ENST00000314759 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 DKK1O94907 266 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 FABP4P15090 132 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 HIKESHIQ53FT3 197 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 SPSB3Q6PJ21 355 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 TMEM123Q8N131 208 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 FBXL14Q8N1E6 418 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 ZFP62Q8NB50 900 aaPredicted RBP11.64□□□□□ -0.55
SKA3-202ENST00000314759 SPTSSAQ969W0 71 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 MOB3AQ96BX8 217 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 TMED3Q9Y3Q3 217 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 TERTO14746 1132 aaKnown RBP11.64□□□□□ -0.55
SKA3-202ENST00000314759 SLC31A2O15432 143 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 ATP6V0CP27449 155 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 PDCD1Q15116 288 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 OR2C3Q8N628 320 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 OR2G3Q8NGZ4 309 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 ABHD5Q8WTS1 349 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 SMDT1Q9H4I9 107 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 LIPGQ9Y5X9 500 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 CHCHD2Q9Y6H1 151 aaPredicted RBP11.64□□□□□ -0.55
SKA3-202ENST00000314759 ADAMTS20P59510 1910 aa11.64□□□□□ -0.55
SKA3-202ENST00000314759 A0A087X0M5 115 aa11.63□□□□□ -0.55
SKA3-202ENST00000314759 A0A1B0GX30 115 aa11.63□□□□□ -0.55
SKA3-202ENST00000314759 PPP1R2P9O14990 202 aa11.63□□□□□ -0.55
SKA3-202ENST00000314759 AFF3P51826 1226 aaKnown RBP11.63□□□□□ -0.55
SKA3-202ENST00000314759 C4orf17Q53FE4 359 aa11.63□□□□□ -0.55
SKA3-202ENST00000314759 OR6C1Q96RD1 312 aa11.63□□□□□ -0.55
SKA3-202ENST00000314759 IGSF23A1L1A6 192 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms