RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 FAHD2BQ6P2I3 314 aaPredicted RBP18.93■□□□□ 0.62
SMAD1-201ENST00000302085 PEG10Q86TG7 708 aaKnown RBP18.93■□□□□ 0.62
SMAD1-201ENST00000302085 LINC00596Q86U02 117 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 OR2T35Q8NGX2 323 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 FAHD2AQ96GK7 314 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 RHOFQ9HBH0 211 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 ELOVL5Q9NYP7 299 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 JKAMPQ9P055 326 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 C9orf170A2RU37 121 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 GOSR2O14653 212 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 HLA-AP01891 365 aaKnown RBP18.93■□□□□ 0.62
SMAD1-201ENST00000302085 GIPP09681 153 aaPredicted RBP18.93■□□□□ 0.62
SMAD1-201ENST00000302085 CCKARP32238 428 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 H2BFSP57053 126 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 IL13RA2Q14627 380 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 ZNF660Q6AZW8 331 aaPredicted RBP18.93■□□□□ 0.62
SMAD1-201ENST00000302085 C11orf53Q8IXP5 236 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 RTBDNQ9BSG5 229 aaPredicted RBP18.93■□□□□ 0.62
SMAD1-201ENST00000302085 CXXC4Q9H2H0 198 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 MSL2Q9HCI7 577 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 POLDIP2Q9Y2S7 368 aa18.93■□□□□ 0.62
SMAD1-201ENST00000302085 FAM172BPA6NC97 362 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 F5H5P2 479 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 CRYAAP02489 173 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 OR5H8P0DN80 308 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 FPR2P25090 351 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 RGS7BPQ6MZT1 257 aaPredicted RBP18.92■□□□□ 0.62
SMAD1-201ENST00000302085 SLC22A25Q6T423 547 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 SUMF2Q8NBJ7 301 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 TMEM185AQ8NFB2 350 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 NRIP2Q9BQI9 281 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 LIME1Q9H400 295 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 MGAT4AQ9UM21 535 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 TLN1Q9Y490 2541 aaKnown RBP18.92■□□□□ 0.62
SMAD1-201ENST00000302085 BSNQ9UPA5 3926 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 TRAV24A0A0B4J272 114 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.92■□□□□ 0.62
SMAD1-201ENST00000302085 MCRIP1C9JLW8 97 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 PGA5P0DJD9 388 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 BAMBIQ13145 260 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 C1QTNF12Q5T7M4 302 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 DCAF12L2Q5VW00 463 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 Q6P435 159 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 DHRS11Q6UWP2 260 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 TMEM230Q96A57 120 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 SCGB3A2Q96PL1 93 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 ZNF2Q9BSG1 426 aaPredicted RBP18.92■□□□□ 0.62
SMAD1-201ENST00000302085 ZNF286AQ9HBT8 521 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 NECAP2Q9NVZ3 263 aa18.92■□□□□ 0.62
SMAD1-201ENST00000302085 A0A1B0GWJ7 208 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 C16orf97H3BN30 126 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 HSPB6O14558 160 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 SLC22A5O76082 557 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 NAPSAO96009 420 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 PI3P19957 117 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 DNASE1P24855 282 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 ID4P47928 161 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 NKX6-1P78426 367 aaPredicted RBP18.91■□□□□ 0.62
SMAD1-201ENST00000302085 DHODHQ02127 395 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 LRP11Q86VZ4 500 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 C9orf62Q8N4C0 152 aa18.91■□□□□ 0.62
SMAD1-201ENST00000302085 HS3ST1O14792 307 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 GLRA1P23415 457 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 CD34P28906 385 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 TAS2R31P59538 309 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 RAP2BP61225 183 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 IL13RA1P78552 427 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 KLRB1Q12918 225 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 Q8IYB0 196 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 TMEM246Q9BRR3 403 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 IFT22Q9H7X7 185 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 SPACA1Q9HBV2 294 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 CHMP1AQ9HD42 196 aaPredicted RBP18.9■□□□□ 0.62
SMAD1-201ENST00000302085 SPEF1Q9Y4P9 236 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 ACAA1P09110 424 aaPredicted RBP18.9■□□□□ 0.62
SMAD1-201ENST00000302085 GSTT2P0CG29 244 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 ZNF250P15622 560 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 MPPED2Q15777 294 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 MITD1Q8WV92 249 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 RDH5Q92781 318 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 DMRTA2Q96SC8 542 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 WDR13Q9H1Z4 485 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 Q9N2K0 584 aa18.9■□□□□ 0.62
SMAD1-201ENST00000302085 DEGS1O15121 323 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 ZNF205O95201 554 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 VAMP1P23763 118 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 GLRXP35754 106 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 SURF2Q15527 256 aaPredicted RBP18.89■□□□□ 0.61
SMAD1-201ENST00000302085 TMEM128Q5BJH2 165 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 LY6G6FQ5SQ64 297 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 Q6ZS49 121 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 ZNF826PQ6ZT77 177 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 SPERTQ8NA61 448 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 GRPEL2Q8TAA5 225 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 DPCDQ9BVM2 203 aaPredicted RBP18.89■□□□□ 0.61
SMAD1-201ENST00000302085 TMPRSS13Q9BYE2 586 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 TLNRD1Q9H1K6 362 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 DECR2Q9NUI1 292 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 DUSP13Q9UII6 198 aa18.89■□□□□ 0.61
SMAD1-201ENST00000302085 ATP6V1G2-DDX39BF2Z307 99 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms