RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 H3BMH7 237 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 K7N7A8 449 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 ADAM20O43506 726 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 ANOS1P23352 680 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 CTHP32929 405 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 SUCLG1P53597 346 aaKnown RBP9.96□□□□□ -0.81
TRUB1-201ENST00000298746 TESK1Q15569 626 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 C21orf62-AS1Q17RA5 79 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 PRAMEF20Q5VT98 475 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 WDR25Q64LD2 544 aaPredicted RBP9.96□□□□□ -0.81
TRUB1-201ENST00000298746 TMEM37Q8WXS4 190 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 GNPNAT1Q96EK6 184 aaPredicted RBP9.96□□□□□ -0.81
TRUB1-201ENST00000298746 FBRSQ9HAH7 460 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 PISDQ9UG56 409 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 TMED3Q9Y3Q3 217 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 M0R135 149 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 SOX15O60248 233 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 SCGB1D1O95968 90 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF16P17020 682 aaPredicted RBP9.96□□□□□ -0.82
TRUB1-201ENST00000298746 IL2RGP31785 369 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 RNF4P78317 190 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 MALLQ13021 153 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 LYPD6BQ8NI32 183 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 RHBDD1Q8TEB9 315 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF799Q96GE5 643 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 MESP1Q9BRJ9 268 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 LRRC61Q9BV99 259 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF581Q9P0T4 197 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 PIAS3Q9Y6X2 628 aa9.96□□□□□ -0.82
TRUB1-201ENST00000298746 IGHV3-15A0A0B4J1V0 119 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 HSD17B6O14756 317 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 DHRS3O75911 302 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 IGHMP01871 453 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 PNLIPP16233 465 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 GLIPR1P48060 266 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 LSM6P62312 80 aaKnown RBP9.95□□□□□ -0.82
TRUB1-201ENST00000298746 H3F3AP84243 136 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 PIGYQ3MUY2 71 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 TCEAL6Q6IPX3 200 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 LRP11Q86VZ4 500 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 TMEM252Q8N6L7 170 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 IL22RA1Q8N6P7 574 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 GJC3Q8NFK1 279 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 M1APQ8TC57 530 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 TPSD1Q9BZJ3 242 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 DOCK11Q5JSL3 2073 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 A0A1W2PPQ1 181 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 IGSF23A1L1A6 192 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 NPIPA2E9PIF3 369 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 NPIPA3F8WFD2 350 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 AADACP22760 399 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ELLP55199 621 aaPredicted RBP9.95□□□□□ -0.82
TRUB1-201ENST00000298746 BATFQ16520 125 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 KIAA2026Q5HYC2 2103 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF787Q6DD87 383 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 PIGCQ92535 297 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 RPUSD4Q96CM3 377 aaKnown RBP9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ST3GAL6Q9Y274 331 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 SPEGQ15772 3267 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 TRBV11-1A0A0K0K1C0 115 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 C3orf85A0A1B0GTC6 90 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ANKUB1A6NFN9 424 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 HMGB3O15347 200 aaKnown RBP9.95□□□□□ -0.82
TRUB1-201ENST00000298746 FUT3P21217 361 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ERVS71-1P61550 626 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 SMAD4Q13485 552 aaKnown RBP9.95□□□□□ -0.82
TRUB1-201ENST00000298746 BOD1Q96IK1 185 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF665Q9H7R5 613 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 SIRT7Q9NRC8 400 aa9.95□□□□□ -0.82
TRUB1-201ENST00000298746 ARHGAP21Q5T5U3 1957 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 XKRY2A2RUG3 117 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF705FA8MVS1 300 aaPredicted RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 PPP5D1E7EU14 171 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 DFFBO76075 338 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF705DP0CH99 300 aaPredicted RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF705BP0CI00 300 aaPredicted RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 PP6455Q8WZ26 134 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 SPTSSAQ969W0 71 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 TP53RKQ96S44 253 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 GABRG3Q99928 467 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 PLK3Q9H4B4 646 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 FOXD3Q9UJU5 478 aaPredicted RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 DKKL1Q9UK85 242 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 HS3ST3A1Q9Y663 406 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 CHST1O43916 411 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 ZNF17P17021 662 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 CCNOP22674 350 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 TMEM267Q0VDI3 215 aaPredicted RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 GPR137CQ8N3F9 429 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 OR51H1Q8NH63 302 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 NAT6Q93015 286 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 RBMXL1Q96E39 390 aaKnown RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 SMIM7Q9BQ49 75 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 MTIF3Q9H2K0 278 aaKnown RBP9.94□□□□□ -0.82
TRUB1-201ENST00000298746 LIME1Q9H400 295 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
TRUB1-201ENST00000298746 TK1P04183 234 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms