RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SPACA1Q9HBV2 294 aa20.7■□□□□ 0.91
GTF2A1-201ENST00000298173 TANC2Q9HCD6 1990 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 MEIS3P1A6NDR6 274 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 DEGS1O15121 323 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 GLAP06280 429 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 LMO1P25800 156 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 GNG2P59768 71 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 SMIM21Q3B7S5 101 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 FIP1L1Q6UN15 594 aaKnown RBP20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 DCDC5Q6ZRR9 648 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 OCSTAMPQ9BR26 566 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 TRAF4Q9BUZ4 470 aaPredicted RBP20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 ANAPC10Q9UM13 185 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 NPTNQ9Y639 398 aa20.7■□□□□ 0.9
GTF2A1-201ENST00000298173 LINC00854A0A1B0GVQ3 168 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 SH2D1BO14796 132 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 INPP1P49441 399 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 DYRK1AQ13627 763 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 TRAPPC6BQ86SZ2 158 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 OR11L1Q8NGX0 322 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 C11orf54Q9H0W9 315 aaPredicted RBP20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 TAS2R8Q9NYW2 309 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 AK3Q9UIJ7 227 aa20.69■□□□□ 0.9
GTF2A1-201ENST00000298173 ECDO95905 644 aaPredicted RBP20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 OR2H2O95918 312 aa20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 HPXP02790 462 aa20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 GSTT2BP0CG30 244 aa20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 ARFRP1Q13795 201 aa20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 SUMF2Q8NBJ7 301 aa20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 TREM2Q9NZC2 230 aa20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 ZNF107Q9UII5 783 aaPredicted RBP20.68■□□□□ 0.9
GTF2A1-201ENST00000298173 HAND1O96004 215 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 CYB5R3P00387 301 aaPredicted RBP20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 NAT1P18440 290 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 ACTBP60709 375 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 ACTG1P63261 375 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 OXA1LQ15070 435 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 SP5Q6BEB4 398 aaPredicted RBP20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 GVQW1Q8N7I0 195 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 CHPT1Q8WUD6 406 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 VRK1Q99986 396 aaPredicted RBP20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 DCAF16Q9NXF7 216 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 CACNG2Q9Y698 323 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 UBE2QL1A1L167 161 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 RFPL4AA6NLU0 287 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 RFPL4AL1F8VTS6 287 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 IFNL4K9M1U5 179 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 SLC33A1O00400 549 aaPredicted RBP20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 LYRM1O43325 122 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 PSG2P11465 335 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 ZNF44P15621 663 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 RFX2P48378 723 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 GDPD3Q7L5L3 318 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 DEDD2Q8WXF8 326 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 HPS1Q92902 700 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 NLKQ9UBE8 527 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 GLS2Q9UI32 602 aa20.67■□□□□ 0.9
GTF2A1-201ENST00000298173 LRRK2Q5S007 2527 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 LRBAP50851 2863 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 DSCAMO60469 2012 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 MCRIP1C9JLW8 97 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 CSF1P09603 554 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 CBX5P45973 191 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 TLE4Q04727 773 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 FAM201AQ5SY85 155 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 RDH5Q92781 318 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 CMSS1Q9BQ75 279 aaKnown RBP20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 HDHD3Q9BSH5 251 aaPredicted RBP20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 DPCDQ9BVM2 203 aaPredicted RBP20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 OR14J1Q9UGF5 321 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 WIPI2Q9Y4P8 454 aa20.66■□□□□ 0.9
GTF2A1-201ENST00000298173 LRRC30A6NM36 301 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 IRF2P14316 349 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 RCVRNP35243 200 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 AP3S2P59780 193 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 TEX36Q5VZQ5 186 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 BPIFB2Q8N4F0 458 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 CD177Q8N6Q3 437 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 BOLLQ8N9W6 283 aaKnown RBP20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 TMEM229BQ8NBD8 167 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 DYRK2Q92630 601 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 COX4I2Q96KJ9 171 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 C7orf50Q9BRJ6 194 aaKnown RBP20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 PLEKHF2Q9H8W4 249 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 UBTD1Q9HAC8 227 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 LAMP3Q9UQV4 416 aa20.65■□□□□ 0.9
GTF2A1-201ENST00000298173 IGKV1D-17A0A075B6S4 117 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 OR2AT4A6NND4 320 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 VGLL3A8MV65 326 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 TMEM178BH3BS89 294 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 PTTG1O95997 202 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 CEBPDP49716 269 aaPredicted RBP20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 RBM39Q14498 530 aaKnown RBP20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 SHEQ5VZ18 495 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 HOGA1Q86XE5 327 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 OR5T2Q8NGG2 359 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 RAB1BQ9H0U4 201 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 HRASLSQ9HDD0 168 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 TMEM106BQ9NUM4 274 aa20.64■□□□□ 0.9
GTF2A1-201ENST00000298173 ZNF222Q9UK12 451 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms