RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FOXJ2Q9P0K8 574 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 NTMQ9P121 344 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 MIOXQ9UGB7 285 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 LOC102723971A0A1B0GUV8 181 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 TCRBV16S1A1N1A0A5B0 115 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 C7orf66A4D0T2 115 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 M0QZK8 103 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 GGCTO75223 188 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 CFHR1Q03591 330 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 JMJD6Q6NYC1 403 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 SEZ6L2Q6UXD5 910 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 YRDCQ86U90 279 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 VASH2Q86V25 355 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 Q9N2K0 584 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 FAM60AQ9NP50 221 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 DOCK9Q9BZ29 2069 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 C5orf49A4QMS7 147 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 C1QTNF9BB2RNN3 333 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 B4DEV8 164 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 OGG1O15527 345 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 C1QTNF9P0C862 333 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 NDUFB7P17568 137 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 GLRA1P23415 457 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 PEBP1P30086 187 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 FAM209AQ5JX71 171 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 OTPQ5XKR4 325 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 LINC00696Q6ZRV3 163 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 SCCPDHQ8NBX0 429 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 KTI12Q96EK9 354 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 TRIB1Q96RU8 372 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 BET1LQ9NYM9 111 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 ELF5Q9UKW6 265 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 COL5A1P20908 1838 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 TRBV5-3A0A0A0MS03 114 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 A0A1W2PPV9 198 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 RBFOX3A6NFN3 312 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 LGALS4P56470 323 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 TMEM33P57088 247 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 KISS1Q15726 138 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 CBLN2Q8IUK8 224 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 SLC26A10Q8NG04 563 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF764Q96H86 408 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 C9orf172C9J069 976 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 PTBP3O95758 552 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 EPPINO95925 133 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 IGHA1P01876 353 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 SSPNQ14714 243 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 COX19Q49B96 90 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 FA2HQ7L5A8 372 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 C12orf49Q9H741 205 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 DECR2Q9NUI1 292 aa10.48□□□□□ -0.73
SYNGAP1-201ENST00000293748 C7orf77A4D0Y5 90 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 CRYM-AS1A6NIL9 109 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF154Q13106 437 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR11H7Q8NGC8 314 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 GALMQ96C23 342 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 TNRC6BQ9UPQ9 1833 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 SPTBN2O15020 2390 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 CXCL13O43927 109 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 CYC1P08574 325 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 PTGFRP43088 359 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 PPIAP62937 165 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 SLC38A11Q08AI6 406 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 FUT7Q11130 342 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 FOXF1Q12946 379 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 IL24Q13007 206 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF79Q15937 498 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 FXNQ16595 210 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 DEFB109BQ30KR1 87 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 WDR73Q6P4I2 378 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 SPACA3Q8IXA5 215 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 BOD1Q96IK1 185 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 SIRT3Q9NTG7 399 aaPredicted RBP10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 LRRK1Q38SD2 2015 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 ARHGEF17Q96PE2 2063 aaPredicted RBP10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 SERTM2A0A1B0GWG4 89 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 COX7A2P2O60397 106 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 CTSVO60911 334 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 HPXP02790 462 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 PAX5Q02548 391 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 ADPRHL1Q8NDY3 354 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 APOBEC4Q8WW27 367 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 ROBO4Q8WZ75 1007 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR2A5Q96R48 311 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 TMPRSS13Q9BYE2 586 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 WDR54Q9H977 334 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 SIRT7Q9NRC8 400 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 SZT2Q5T011 3432 aa10.47□□□□□ -0.73
SYNGAP1-201ENST00000293748 A0A1W2PNV4 684 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 FAM166BA8MTA8 275 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 ONECUT2O95948 504 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 HPP00738 406 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 TMEM11P17152 192 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 TIAL1Q01085 375 aaKnown RBP eCLIP10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 BSXQ3C1V8 233 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 SMUG1Q53HV7 270 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms