RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 FBLIM1Q8WUP2 373 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 ZNF501Q96CX3 271 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-201ENST00000292478 GPA33Q99795 319 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 ALX4Q9H161 411 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-201ENST00000292478 AAMDCQ9H7C9 122 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 TRAV38-1A0A0B4J264 116 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 SOCS1O15524 211 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 CCL3P10147 92 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 FOSL1P15407 271 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 CEACAM3P40198 252 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 LIMS1P48059 325 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 ERVFC1-1P60608 527 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 TMEM88Q6PEY1 159 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 INO80CQ6PI98 192 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-201ENST00000292478 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 HES7Q9BYE0 225 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
PTCD1-201ENST00000292478 WNK3Q9BYP7 1800 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 RBBP6Q7Z6E9 1792 aaKnown RBP11.26□□□□□ -0.61
PTCD1-201ENST00000292478 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 FSTP19883 344 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 VDAC1P21796 283 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 SOX8P57073 446 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 TPPP2P59282 170 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 TBC1D26Q86UD7 250 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 IGKV1-8A0A0C4DH67 115 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 PLA2G10O15496 165 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 SERTM2A0A1B0GWG4 89 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 DUXBA0A1W2PPF3 345 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 A0A1W2PR80 420 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 LANCL1O43813 399 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 PATE4P0C8F1 98 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 GZMHP20718 246 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 GPR27Q9NS67 375 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 R4GN57 208 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 DOCK5Q9H7D0 1870 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 CSF2RBP32927 897 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 TMEM33P57088 247 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 SLC24A4Q8NFF2 622 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 OR2M7Q8NG81 312 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 SEBOXQ9HB31 216 aaPredicted RBP11.25□□□□□ -0.61
PTCD1-201ENST00000292478 LRRC3CA6NJW4 275 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 OR5H1A6NKK0 313 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 SEC14L6B5MCN3 397 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 H0Y8G0 127 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 PDZD11Q5EBL8 140 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 KLHDC1Q8N7A1 406 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 OR2I1PQ8NGU4 316 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 ATP5SQ99766 215 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 BMP5P22003 454 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 MAGEA5P43359 124 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 CDC34P49427 236 aaPredicted RBP11.25□□□□□ -0.61
PTCD1-201ENST00000292478 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
PTCD1-201ENST00000292478 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 NTN1O95631 604 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 CDS2O95674 445 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 IGKV1D-16P01601 117 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 NTF3P20783 257 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 CD200P41217 278 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 GNG10P50151 68 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 FAM3AP98173 230 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 OR5I1Q13606 314 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 PLPPR5Q32ZL2 321 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 RFESDQ8TAC1 157 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 MRGPRDQ8TDS7 321 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 GMPPAQ96IJ6 420 aaPredicted RBP11.25□□□□□ -0.61
PTCD1-201ENST00000292478 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 RAB1BQ9H0U4 201 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 SH2D2AQ9NP31 389 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 MANBALQ9NQG1 85 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
PTCD1-201ENST00000292478 TRAV8-7A0A075B6U6 113 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 SYNGR2O43760 224 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 ZNF737O75373 536 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 HAND1O96004 215 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 VSIG8P0DPA2 414 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 CCL2P13500 99 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 THYN1Q9P016 225 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 CLCF1Q9UBD9 225 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 OPN4Q9UHM6 478 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 DTX4Q9Y2E6 619 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 A0A0U1RQV5 110 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 ANKRD34CP0C6C1 535 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 OPRK1P41145 380 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 ZNF79Q15937 498 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 HOGA1Q86XE5 327 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 OR4A4PQ8NGN8 299 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 DEFB108AA8MXU0 73 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 TSPAN2O60636 221 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 SCO1O75880 301 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 PMS2CLQ68D20 193 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 TIPARPQ7Z3E1 657 aaKnown RBP11.24□□□□□ -0.61
PTCD1-201ENST00000292478 BCL2L2Q92843 193 aaPredicted RBP11.24□□□□□ -0.61
PTCD1-201ENST00000292478 TMPRSS5Q9H3S3 457 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 IL36GQ9NZH8 169 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 RPL36A-HNRNPH2H7BZ11 118 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 GEMIN2O14893 280 aaKnown RBP11.24□□□□□ -0.61
PTCD1-201ENST00000292478 PPYP01298 95 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms