RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 SIRPB2Q5JXA9 342 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 APOBEC3HQ6NTF7 200 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 RSPO2Q6UXX9 243 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 TAC4Q86UU9 113 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 FAM71AQ8IYT1 594 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 LYG1Q8N1E2 194 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 FGF13Q92913 245 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SIGLEC10Q96LC7 697 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 MS4A4EQ96PG1 132 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CDX2Q99626 313 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 JAM3Q9BX67 310 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 JPT2Q9H910 190 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZMAT3Q9HA38 289 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 GLRX2Q9NS18 164 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 KCNK7Q9Y2U2 307 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 PXMP4Q9Y6I8 212 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF541Q9H0D2 1346 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 DPRXA6NFQ7 191 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 VAMP5O95183 116 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CST4P01036 141 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CTSBP07858 339 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 RAC3P60763 192 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ENDOGQ14249 297 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CCL14Q16627 93 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SLC10A6Q3KNW5 377 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 NKAIN1Q4KMZ8 207 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF385CQ66K41 422 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 TOMM20LQ6UXN7 152 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SYT9Q86SS6 491 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ADAD2Q8NCV1 583 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF502Q8TBZ5 544 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SLC7A13Q8TCU3 470 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 MAP6Q96JE9 813 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 NKX6-2Q9C056 277 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SLC17A4Q9Y2C5 497 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 A0A1W2PPZ6 126 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF724A8MTY0 619 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 STC1P52823 247 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CFHR1Q03591 330 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 PDCD1Q15116 288 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SYPL1Q16563 259 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 PHF13Q86YI8 300 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 R3HDM4Q96D70 268 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CMBLQ96DG6 245 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 GDF2Q9UK05 429 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 C7orf72A4D263 438 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 AHRRA9YTQ3 701 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 TMPRSS2O15393 492 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 TGFB1I1O43294 461 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 FRS3O43559 492 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 MT-ND4LP03901 98 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 JUNBP17275 347 aaPredicted RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 NAT1P18440 290 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ZBTB25P24278 435 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 CKS1BP61024 79 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 RANP62826 216 aaKnown RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 HOXC5Q00444 222 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 EMX1Q04741 257 aaPredicted RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 LRRC75BQ2VPJ9 315 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 C18orf21Q32NC0 220 aaPredicted RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF528Q3MIS6 628 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 OR1B1Q8NGR6 318 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 SELENOIQ9C0D9 397 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 TMEM140Q9NV12 185 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 RCE1Q9Y256 329 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 TBL2Q9Y4P3 447 aaKnown RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 SIP14410 1827 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 LINC00862A6NCI5 91 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 MPTX1A8MV57 137 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 IFNL4K9M1U5 179 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ETHE1O95571 254 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 HLA-DQB2P05538 268 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 NID1P14543 1247 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 GIPRP48546 466 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF140P52738 457 aaPredicted RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 PRICKLE4Q2TBC4 344 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 HLA-BQ31612 363 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 PIP5KL1Q5T9C9 394 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 COL13A1Q5TAT6 717 aaPredicted RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 CPZQ66K79 652 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 GUSBP11Q6P575 273 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 LCN15Q6UWW0 184 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 DPY19L2P2Q6ZN68 376 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ZDHHC23Q8IYP9 409 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 TMEM86BQ8N661 226 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 OR1L6Q8NGR2 347 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 SCGB3A1Q96QR1 104 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 PAXXQ9BUH6 204 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ZDHHC18Q9NUE0 388 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 GPR132Q9UNW8 380 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 DUXBA0A1W2PPF3 345 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 TMEM30CPA0ZSE6 113 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 MYBPHLA2RUH7 354 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 PTBP1P26599 531 aaKnown RBP eCLIP3.9□□□□□ -1.789e-11■■■■■ 51.9
NCOA1-201ENST00000288599 RBM11P57052 281 aaKnown RBP3.9□□□□□ -1.78
NCOA1-201ENST00000288599 RELAQ04206 551 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 OR10J3Q5JRS4 329 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ABHD12Q8N2K0 398 aa3.9□□□□□ -1.78
NCOA1-201ENST00000288599 ANKRD29Q8N6D5 301 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms