RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FXYD6Q9H0Q3 95 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 SPACA1Q9HBV2 294 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 SHPKQ9UHJ6 478 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 PURGQ9UJV8 347 aaKnown RBP8.67□□□□□ -1.02
C9orf43-201ENST00000288462 CEP295Q9C0D2 2601 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 A0A1B0GWJ7 208 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 FAM221AA4D161 298 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 HMSDA8MTL9 139 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 RHBDL1O75783 438 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 RPS2P15880 293 aaKnown RBP8.66□□□□□ -1.02
C9orf43-201ENST00000288462 TMPRSS3P57727 454 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 ERVK11-1P61568 191 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 SUPT4H1P63272 117 aaKnown RBP8.66□□□□□ -1.02
C9orf43-201ENST00000288462 BAMBIQ13145 260 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 IKZF1Q13422 519 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 C1QTNF12Q5T7M4 302 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 MBNL2Q5VZF2 373 aaKnown RBP8.66□□□□□ -1.02
C9orf43-201ENST00000288462 DHRS11Q6UWP2 260 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 C3P1Q6ZMU1 363 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 Q8IYB0 196 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 SCCPDHQ8NBX0 429 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 GTF3AQ92664 365 aaKnown RBP8.66□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF2Q9BSG1 426 aaPredicted RBP8.66□□□□□ -1.02
C9orf43-201ENST00000288462 LIME1Q9H400 295 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 HEXA-AS1Q9H8Q6 139 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 POLDIP2Q9Y2S7 368 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 SPTBN2O15020 2390 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 MLNRO43193 412 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 SNAPC5O75971 98 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 GLAP06280 429 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 CTSDP07339 412 aaPredicted RBP8.66□□□□□ -1.02
C9orf43-201ENST00000288462 PI3P19957 117 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF81P51508 661 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 NAAAQ02083 359 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF154Q13106 437 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 OR8G1Q15617 311 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 IGFBP7Q16270 282 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF767PQ75MW2 155 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 DOLPP1Q86YN1 238 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 CISD2Q8N5K1 135 aaKnown RBP8.66□□□□□ -1.02
C9orf43-201ENST00000288462 OR8G5Q8NG78 346 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 CASTOR1Q8WTX7 329 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 S100PBPQ96BU1 408 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 NRIP2Q9BQI9 281 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 SLC23A1Q9UHI7 598 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF835Q9Y2P0 537 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 ACACAQ13085 2346 aa8.66□□□□□ -1.02
C9orf43-201ENST00000288462 TRAV14DV4A0A0A6YYC5 116 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 TRBV6-6A0A0A6YYG2 114 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 CCSO14618 274 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 PRRG2O14669 202 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 ACAA1P09110 424 aaPredicted RBP8.65□□□□□ -1.02
C9orf43-201ENST00000288462 PGA5P0DJD9 388 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 PGAM2P15259 253 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 UCNP55089 124 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 LIN54Q6MZP7 749 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 CLEC18BQ6UXF7 455 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 ELMOD3Q96FG2 381 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 PIGMQ9H3S5 423 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 Q9N2K0 584 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 TMEM100Q9NV29 134 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 C14orf166Q9Y224 244 aaKnown RBP8.65□□□□□ -1.02
C9orf43-201ENST00000288462 DMXL2Q8TDJ6 3036 aa8.65□□□□□ -1.02
C9orf43-201ENST00000288462 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.65□□□□□ -1.03
C9orf43-201ENST00000288462 RFPL4AA6NLU0 287 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 A8MXE2 369 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 RFPL4AL1F8VTS6 287 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 H0YL77 283 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 CXCL2P19875 107 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 GLRA1P23415 457 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 SEC61A1P61619 476 aaKnown RBP8.65□□□□□ -1.03
C9orf43-201ENST00000288462 ZNF718Q3SXZ3 478 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 Q6P435 159 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 SUMF2Q8NBJ7 301 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 TLNRD1Q9H1K6 362 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 WDR13Q9H1Z4 485 aa8.65□□□□□ -1.03
C9orf43-201ENST00000288462 CHMP1AQ9HD42 196 aaPredicted RBP8.65□□□□□ -1.03
C9orf43-201ENST00000288462 BSNQ9UPA5 3926 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 MCRIP1C9JLW8 97 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 TIMM8AO60220 97 aaPredicted RBP8.64□□□□□ -1.03
C9orf43-201ENST00000288462 NOS1APO75052 506 aaPredicted RBP8.64□□□□□ -1.03
C9orf43-201ENST00000288462 NFYAP23511 347 aaPredicted RBP8.64□□□□□ -1.03
C9orf43-201ENST00000288462 DUSP1P28562 367 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 SSTR2P30874 369 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 UCP3P55916 312 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 SORDQ00796 357 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 GFRALQ6UXV0 394 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 Q6ZR03 302 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 POC1AQ8NBT0 407 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 DPCDQ9BVM2 203 aaPredicted RBP8.64□□□□□ -1.03
C9orf43-201ENST00000288462 CXXC4Q9H2H0 198 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 CLEC4MQ9H2X3 399 aaPredicted RBP8.64□□□□□ -1.03
C9orf43-201ENST00000288462 RIMS4Q9H426 269 aaPredicted RBP8.64□□□□□ -1.03
C9orf43-201ENST00000288462 HES4Q9HCC6 221 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 TINAGQ9UJW2 476 aa8.64□□□□□ -1.03
C9orf43-201ENST00000288462 LAMA5O15230 3695 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms