RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 C4orf46Q504U0 113 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 Q6ZPA2 131 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 TMEM171Q8WVE6 324 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 OSGIN2Q9Y236 505 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 SDCBPO00560 298 aaPredicted RBP18.73■□□□□ 0.59
CCDC7-201ENST00000277657 NOS1APO75052 506 aaPredicted RBP18.73■□□□□ 0.59
CCDC7-201ENST00000277657 GRPP07492 148 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 SFTPCP11686 197 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 DUSP1P28562 367 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 KCNJ8Q15842 424 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 C11orf53Q8IXP5 236 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 ZNF431Q8TF32 576 aaPredicted RBP18.73■□□□□ 0.59
CCDC7-201ENST00000277657 PCNX1Q96RV3 2341 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 MSL2Q9HCI7 577 aa18.73■□□□□ 0.59
CCDC7-201ENST00000277657 FAM221AA4D161 298 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 ATP6V1G2-DDX39BF2Z307 99 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 F5H5P2 479 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 GLAP06280 429 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 ARPC4P59998 168 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 AADACL3Q5VUY0 350 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 C17orf107Q6ZR85 190 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 LRP11Q86VZ4 500 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 MARCH1Q8TCQ1 289 aa18.72■□□□□ 0.59
CCDC7-201ENST00000277657 IGLV3-9A0A075B6K5 115 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 NAPSAO96009 420 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 GZMKP49863 264 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 FAHD2BQ6P2I3 314 aaPredicted RBP18.71■□□□□ 0.59
CCDC7-201ENST00000277657 PEG10Q86TG7 708 aaKnown RBP18.71■□□□□ 0.59
CCDC7-201ENST00000277657 FAHD2AQ96GK7 314 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 ZNF436Q9C0F3 470 aaPredicted RBP18.71■□□□□ 0.59
CCDC7-201ENST00000277657 GPR132Q9UNW8 380 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 ATRXP46100 2492 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 MCRIP1C9JLW8 97 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 C3orf80F5H4A9 247 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 THBDP07204 575 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 RPS23P62266 143 aaKnown RBP18.71■□□□□ 0.59
CCDC7-201ENST00000277657 SRSF7Q16629 238 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCDC7-201ENST00000277657 Q6P435 159 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 TMEM108Q6UXF1 575 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 Q6ZS49 121 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 SUMF2Q8NBJ7 301 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 POC1AQ8NBT0 407 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 GTF3AQ92664 365 aaKnown RBP18.71■□□□□ 0.59
CCDC7-201ENST00000277657 ZNF286AQ9HBT8 521 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 HES4Q9HCC6 221 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 MGAT4CQ9UBM8 478 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 DUSP13Q9UII6 198 aa18.71■□□□□ 0.59
CCDC7-201ENST00000277657 ITPR1Q14643 2758 aa18.7■□□□□ 0.58
CCDC7-201ENST00000277657 TRAV24A0A0B4J272 114 aa18.7■□□□□ 0.58
CCDC7-201ENST00000277657 FABP7O15540 132 aa18.7■□□□□ 0.58
CCDC7-201ENST00000277657 NPY4RP50391 375 aa18.7■□□□□ 0.58
CCDC7-201ENST00000277657 KLF3P57682 345 aaPredicted RBP18.7■□□□□ 0.58
CCDC7-201ENST00000277657 DHRS2Q13268 280 aa18.7■□□□□ 0.58
CCDC7-201ENST00000277657 ZNF660Q6AZW8 331 aaPredicted RBP18.7■□□□□ 0.58
CCDC7-201ENST00000277657 ZNF486Q96H40 463 aaPredicted RBP18.7■□□□□ 0.58
CCDC7-201ENST00000277657 CA10Q9NS85 328 aa18.7■□□□□ 0.58
CCDC7-201ENST00000277657 IGHV3-64DA0A0J9YX35 117 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 SMLR1H3BR10 107 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 ZBTB25P24278 435 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 FPR2P25090 351 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 PTAFRP25105 342 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 MZT1Q08AG7 82 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 ZNF146Q15072 292 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 NUP37Q8NFH4 326 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 OR2AK2Q8NG84 335 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 SCGB3A2Q96PL1 93 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 DLL4Q9NR61 685 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 NECAP2Q9NVZ3 263 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 TMEM8BA6NDV4 472 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 OR5H8P0DN80 308 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 ERP29P30040 261 aaKnown RBP18.69■□□□□ 0.58
CCDC7-201ENST00000277657 ADAD2Q8NCV1 583 aaKnown RBP18.69■□□□□ 0.58
CCDC7-201ENST00000277657 C5orf66Q9H5L9 145 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 DECR2Q9NUI1 292 aa18.69■□□□□ 0.58
CCDC7-201ENST00000277657 OR5H14A6NHG9 310 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 NXPH2O95156 264 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 PTBP3O95758 552 aaKnown RBP18.68■□□□□ 0.58
CCDC7-201ENST00000277657 PPP3CBP16298 524 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 PPP1R1AQ13522 171 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 SURF2Q15527 256 aaPredicted RBP18.68■□□□□ 0.58
CCDC7-201ENST00000277657 SLC22A25Q6T423 547 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 DHRS11Q6UWP2 260 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 NLRC3Q7RTR2 1065 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 WFDC8Q8IUA0 241 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 TMEM185AQ8NFB2 350 aa18.68■□□□□ 0.58
CCDC7-201ENST00000277657 DPCDQ9BVM2 203 aaPredicted RBP18.68■□□□□ 0.58
CCDC7-201ENST00000277657 DEGS1O15121 323 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 OR2A4O95047 310 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 CD200P41217 278 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 TAS2R31P59538 309 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 UBE2MP61081 183 aaKnown RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 RBM39Q14498 530 aaKnown RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 MPPED2Q15777 294 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 SPIN3Q5JUX0 258 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 PRAMEF6Q5VXH4 476 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 WDR82Q6UXN9 313 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 ZNF826PQ6ZT77 177 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 LYG2Q86SG7 212 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 C12orf45Q8N5I9 185 aaPredicted RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 KDF1Q8NAX2 398 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms