RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GUK1Q16774 197 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 NTMQ9P121 344 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 KNL1Q8NG31 2342 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 BMPR1BO00238 502 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 SOCS1O15524 211 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 KCNJ3P48549 501 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 CAMPP49913 170 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 DHRS2Q13268 280 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 SLC25A30Q5SVS4 291 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 MOB1BQ7L9L4 216 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 SMRP1Q8NCR6 262 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 SLC25A40Q8TBP6 338 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 LURAP1Q96LR2 239 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 C10orf90Q96M02 699 aa10.48□□□□□ -0.73
SHPRH-201ENST00000275233 KIAA1217Q5T5P2 1943 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 CELA2AP08217 269 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 ZAR1Q86SH2 424 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 FLYWCH2Q96CP2 140 aaKnown RBP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 C19orf43Q9BQ61 176 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 CRISPLD2Q9H0B8 497 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 TMED3Q9Y3Q3 217 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 LIPT2A6NK58 231 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 PNPP00491 289 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 MVDP53602 400 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 PIGYQ3MUY2 71 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 ZDHHC22Q8N966 263 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 OR4D11Q8NGI4 311 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 RNF2Q99496 336 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 MRM2Q9UI43 246 aaKnown RBP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 TRIP12Q14669 1992 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 POLR2GP62487 172 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 MRM1Q6IN84 353 aaKnown RBP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 TRAT1Q6PIZ9 186 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 R3HDM4Q96D70 268 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 NEIL1Q96FI4 390 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 NQO2P16083 231 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 NSUN5P2Q63ZY6 315 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 NUFIP2Q7Z417 695 aaKnown RBP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 ZNF441Q8N8Z8 693 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 TMEM18Q96B42 140 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 THYN1Q9P016 225 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 PAPPAQ13219 1627 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 LANCL1O43813 399 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 ALX3O95076 343 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 NDUFB6O95139 128 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHPRH-201ENST00000275233 SSX1Q16384 188 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 OR10A7Q8NGE5 316 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 OR10G4Q8NGN3 311 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 OR10G9Q8NGN4 311 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 OR10G7Q8NGN6 311 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 PTP4A1Q93096 173 aa10.47□□□□□ -0.73
SHPRH-201ENST00000275233 ARG1P05089 322 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 RAB5AP20339 215 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 HTR1DP28221 377 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 NHLH1Q02575 133 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 NHLH2Q02577 135 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 YTHDF2Q9Y5A9 579 aaKnown RBP10.46□□□□□ -0.73
SHPRH-201ENST00000275233 RREB1Q92766 1687 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 USF1P22415 310 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-201ENST00000275233 GAB4Q2WGN9 574 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 ASCL3Q9NQ33 180 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 FRRS1LQ9P0K9 344 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 CXorf51AA0A1B0GTR3 108 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 MAP1LC3B2A6NCE7 125 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 OOEPA6NGQ2 149 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 OR5AL1P0C617 328 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 CD40P25942 277 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 PSG6Q00889 435 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 D2HGDHQ8N465 521 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 PRSS3P2Q8NHM4 247 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 DYNLRB2Q8TF09 96 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 MAP1LC3BQ9GZQ8 125 aa10.46□□□□□ -0.73
SHPRH-201ENST00000275233 TRPM6Q9BX84 2022 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 CD160O95971 181 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 CSN3P07498 182 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 PMELP40967 661 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 AESQ08117 197 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 OR5R1Q8NH85 324 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 NUBPLQ8TB37 319 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 SSMEM1Q8WWF3 244 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 GNG7O60262 68 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 PGA3P0DJD8 388 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 BRS3P32247 399 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 HIST1H3AP68431 136 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 RNFT1Q5M7Z0 435 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 DUSP18Q8NEJ0 188 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 INSIG2Q9Y5U4 225 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 AUP1Q9Y679 476 aa10.46□□□□□ -0.74
SHPRH-201ENST00000275233 OR5B21A6NL26 309 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 TRDCB7Z8K6 153 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 ADAP1O75689 374 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 ZNF66Q6ZN08 573 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 MDP1Q86V88 176 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 RAB40CQ96S21 281 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 GPR35Q9HC97 309 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 PARD6AQ9NPB6 346 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 WASHC3Q9Y3C0 194 aa10.45□□□□□ -0.74
SHPRH-201ENST00000275233 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms