RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TAAR3PQ9P1P4 343 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 ERRFI1Q9UJM3 462 aaPredicted RBP13.85□□□□□ -0.19
TPM1-201ENST00000267996 ZNF221Q9UK13 617 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 NBEAQ8NFP9 2946 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 TRAV24A0A0B4J272 114 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 CEACAM18A8MTB9 384 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 C3orf80F5H4A9 247 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 NAPSAO96009 420 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 HPXP02790 462 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 VSIG10L2P0DP72 767 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 MRPS15P82914 257 aaKnown RBP13.85□□□□□ -0.19
TPM1-201ENST00000267996 SORDQ00796 357 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 MPPED2Q15777 294 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 SRSF7Q16629 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
TPM1-201ENST00000267996 NCMAPQ5T1S8 102 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 PRAMEF6Q5VXH4 476 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 WDR82Q6UXN9 313 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 Q6ZPA2 131 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 OVCH2Q7RTZ1 564 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 ZDHHC22Q8N966 263 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 ANXA10Q9UJ72 324 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 IGHV3-64DA0A0J9YX35 117 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 PLSCR5A0PG75 271 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 NKX2-6A6NCS4 301 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 OR2AT4A6NND4 320 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 SNRPGP15A8MWD9 76 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 NXPH2O95156 264 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 CFHR2P36980 270 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 CDSNQ15517 529 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 SCGB2B2Q4G0G5 96 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 SPIN3Q5JUX0 258 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 ATPAF1Q5TC12 328 aaPredicted RBP13.84□□□□□ -0.19
TPM1-201ENST00000267996 CD276Q5ZPR3 534 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 SLC22A25Q6T423 547 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 Q6ZS49 121 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 ZNF826PQ6ZT77 177 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 LHFPL1Q86WI0 220 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 SUMF2Q8NBJ7 301 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 TERB2Q8NHR7 220 aa13.84□□□□□ -0.19
TPM1-201ENST00000267996 DIDO1Q9BTC0 2240 aaKnown RBP13.83□□□□□ -0.2
TPM1-201ENST00000267996 TMEM82A0PJX8 343 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 MCRIP1C9JLW8 97 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 DEGS1O15121 323 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 RLN1P04808 185 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 OR3A3P47888 321 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 CDK10Q15131 360 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 GRK1Q15835 563 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 ADIPOQQ15848 244 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 CHRFAM7AQ494W8 412 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 OR10Z1Q8NGY1 313 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 ELMOD3Q96FG2 381 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 LRRC46Q96FV0 321 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 MEGF10Q96KG7 1140 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 MED28Q9H204 178 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 PPA2Q9H2U2 334 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 ESRP2Q9H6T0 727 aaKnown RBP13.83□□□□□ -0.2
TPM1-201ENST00000267996 NDRG3Q9UGV2 375 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 VSIG4Q9Y279 399 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 ATP23Q9Y6H3 246 aa13.83□□□□□ -0.2
TPM1-201ENST00000267996 TRBV6-6A0A0A6YYG2 114 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 FAM221AA4D161 298 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 A6NLC8 198 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 CBX3Q13185 183 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 FCN2Q15485 313 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 SHEQ5VZ18 495 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 SEC22CQ9BRL7 303 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 DPCDQ9BVM2 203 aaPredicted RBP13.82□□□□□ -0.2
TPM1-201ENST00000267996 GPN1Q9HCN4 374 aaPredicted RBP13.82□□□□□ -0.2
TPM1-201ENST00000267996 KCNJ16Q9NPI9 418 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 UFSP2Q9NUQ7 469 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 EHFQ9NZC4 300 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 SHISA9B4DS77 424 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 GATA4P43694 442 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 ZNF81P51508 661 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 RBM39Q14498 530 aaKnown RBP13.82□□□□□ -0.2
TPM1-201ENST00000267996 ZNF626Q68DY1 528 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 ACP7Q6ZNF0 438 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 TMEM17Q86X19 198 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 DMRTC2Q8IXT2 367 aaPredicted RBP13.82□□□□□ -0.2
TPM1-201ENST00000267996 GALNT11Q8NCW6 608 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 CA5BP1Q8WTZ4 195 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 RIMS4Q9H426 269 aaPredicted RBP13.82□□□□□ -0.2
TPM1-201ENST00000267996 FN3KRPQ9HA64 309 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 ZNF286AQ9HBT8 521 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 C1orf123Q9NWV4 160 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 HIVEP3Q5T1R4 2406 aa13.82□□□□□ -0.2
TPM1-201ENST00000267996 ICE1Q9Y2F5 2266 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 POM121CA8CG34 1229 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 A8MV72 311 aaPredicted RBP13.81□□□□□ -0.2
TPM1-201ENST00000267996 SDCBPO00560 298 aaPredicted RBP13.81□□□□□ -0.2
TPM1-201ENST00000267996 SH2D1BO14796 132 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 WNT9BO14905 357 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 SPRY3O43610 288 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 OR2H2O95918 312 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 ADH4P08319 380 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 OR4A8P0C604 315 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 SULT1A3P0DMM9 295 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 SULT1A4P0DMN0 295 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 ZNF44P15621 663 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 LMO1P25800 156 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms