RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MLLT11Q13015 90 aaPredicted RBP2.99□□□□□ -1.93
CCDC54-201ENST00000261058 PSG7Q13046 419 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 OR8G1Q15617 311 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 NSUN5P1Q3KNT7 163 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 TTLL9Q3SXZ7 439 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 PABPC1L2AQ5JQF8 200 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 PRSS41Q7RTY9 318 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 FAM19A1Q7Z5A9 133 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 SLC34A3Q8N130 599 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 DAW1Q8N136 415 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 OR6V1Q8N148 313 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 C12orf45Q8N5I9 185 aaPredicted RBP2.99□□□□□ -1.93
CCDC54-201ENST00000261058 GDPD1Q8N9F7 314 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 OR10G3Q8NGC4 313 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 DOK4Q8TEW6 326 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 SKA2Q8WVK7 121 aaPredicted RBP2.99□□□□□ -1.93
CCDC54-201ENST00000261058 NARS2Q96I59 477 aaKnown RBP2.99□□□□□ -1.93
CCDC54-201ENST00000261058 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 SELENOIQ9C0D9 397 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 DSN1Q9H410 356 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 FAM96AQ9H5X1 160 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM27Q9HBJ8 222 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 SLC25A37Q9NYZ2 338 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF223Q9UK11 482 aaPredicted RBP2.99□□□□□ -1.93
CCDC54-201ENST00000261058 FBXO5Q9UKT4 447 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 ASF1AQ9Y294 204 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 NEUROG3Q9Y4Z2 214 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 FMN1Q68DA7 1419 aa2.99□□□□□ -1.93
CCDC54-201ENST00000261058 FAM135AQ9P2D6 1515 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 VIRMAQ69YN4 1812 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 PHF3Q92576 2039 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 IGHV3OR16-13A0A075B7E8 117 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 KIR2DL5BA0A0G2JN68 375 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 KIR2DL5BA0A0G2JPC4 375 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 A6NDN8 102 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 OR6C6A6NF89 314 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 PPP5D1E7EU14 171 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 KRTAP4-16G5E9R7 235 aaPredicted RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 TRAPPC2LH3BP13 241 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 K7ERU9 68 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SLC17A3O00476 420 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 MRASO14807 208 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 PDE6DO43924 150 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 HPNP05981 417 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 BCHEP06276 602 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 CST2P09228 141 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 NELFEP18615 380 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 CXCR1P25024 350 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 PSMA1P25786 263 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 IFNGR2P38484 337 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 CD200P41217 278 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 TAS2R41P59536 307 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 COPZ1P61923 177 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 MRPS10P82664 201 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SP4Q02446 784 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 DAZ2Q13117 558 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 BTN1A1Q13410 526 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 C2orf83Q53S99 150 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 ACSBG2Q5FVE4 666 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SAMD13Q5VXD3 122 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 CD200R1LQ6Q8B3 271 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM205Q6UW68 189 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 LINC00299Q6ZSB3 139 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 MBOAT2Q6ZWT7 520 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 KIR2DL5AQ8N109 375 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 EIF4E3Q8N5X7 224 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 OR4S2Q8NH73 311 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 KIR2DL5BQ8NHK3 375 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 NEIL3Q8TAT5 605 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SDR42E1Q8WUS8 393 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 TNFAIP8L1Q8WVP5 186 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 GHSRQ92847 366 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SMIM19Q96E16 107 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 CPNE2Q96FN4 548 aaPredicted RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM101Q96IK0 257 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 MS4A4EQ96PG1 132 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 OR2M2Q96R28 347 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 FOXC2Q99958 501 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 DAZ3Q9NR90 486 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 FBXO6Q9NRD1 293 aaPredicted RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 RASL12Q9NYN1 266 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 TAS2R13Q9NYV9 303 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 OR12D3Q9UGF7 316 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SCP2D1Q9UJQ7 156 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SSR3Q9UNL2 185 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 ING4Q9UNL4 249 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 HSPE1-MOB4S4R3N1 261 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 ABCC12Q96J65 1359 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SNAPC4Q5SXM2 1469 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SCAF11Q99590 1463 aaKnown RBP2.98□□□□□ -1.93
CCDC54-201ENST00000261058 TTC37Q6PGP7 1564 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 DNMBPQ6XZF7 1577 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 SPEF2Q9C093 1822 aa2.98□□□□□ -1.93
CCDC54-201ENST00000261058 IGHV1OR21-1A0A087WYE8 117 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 KIR2DS1A0A191URI9 304 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 ISPDA4D126 451 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 EFCAB9A8MZ26 197 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 C21orf140B9A014 251 aa2.97□□□□□ -1.93
CCDC54-201ENST00000261058 ANKRD63C9JTQ0 380 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms