RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 BCL2L14Q9BZR8 327 aa23.6■■□□□ 1.37
CCM2-201ENST00000258781 ZNF442Q9H7R0 627 aa23.6■■□□□ 1.37
CCM2-201ENST00000258781 IGHV1-18A0A0C4DH31 117 aa23.6■■□□□ 1.37
CCM2-201ENST00000258781 ECI1P42126 302 aa23.6■■□□□ 1.37
CCM2-201ENST00000258781 ADAT1Q9BUB4 502 aaKnown RBP23.6■■□□□ 1.37
CCM2-201ENST00000258781 OPN4Q9UHM6 478 aa23.6■■□□□ 1.37
CCM2-201ENST00000258781 RGS11O94810 467 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 PDCD1Q15116 288 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 TIMM23BQ5SRD1 257 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 LPCAT3Q6P1A2 487 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 C11orf88Q6PI97 169 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 BRICD5Q6PL45 260 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 MITD1Q8WV92 249 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 DYRK2Q92630 601 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 CACNA1BQ00975 2339 aa23.59■■□□□ 1.37
CCM2-201ENST00000258781 IGHV2OR16-5A0A0B4J2B6 119 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 OPRM1P35372 400 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 MPV17P39210 176 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 IL13RA1P78552 427 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 DHODHQ02127 395 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 RBPJQ06330 500 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 IL13RA2Q14627 380 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 C5orf66Q9H5L9 145 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 ZNF286AQ9HBT8 521 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 NECAP2Q9NVZ3 263 aa23.58■■□□□ 1.37
CCM2-201ENST00000258781 SIX6O95475 246 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 AKR1C4P17516 323 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 TMEM128Q5BJH2 165 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 CNTNAP3BQ96NU0 1288 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 HS3ST6Q96QI5 342 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 PHB2Q99623 299 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 CNTNAP3Q9BZ76 1288 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 SPACA1Q9HBV2 294 aa23.58■■□□□ 1.36
CCM2-201ENST00000258781 DUS4LO95620 317 aaKnown RBP23.57■■□□□ 1.36
CCM2-201ENST00000258781 PRKACAP17612 351 aa23.57■■□□□ 1.36
CCM2-201ENST00000258781 SNRPD2P62316 118 aaKnown RBP23.57■■□□□ 1.36
CCM2-201ENST00000258781 ALKBH6Q3KRA9 238 aa23.57■■□□□ 1.36
CCM2-201ENST00000258781 C3orf36Q3SXR2 165 aa23.57■■□□□ 1.36
CCM2-201ENST00000258781 C1QTNF12Q5T7M4 302 aa23.57■■□□□ 1.36
CCM2-201ENST00000258781 GRPEL2Q8TAA5 225 aa23.57■■□□□ 1.36
CCM2-201ENST00000258781 TMPRSS13Q9BYE2 586 aa23.57■■□□□ 1.36
CCM2-201ENST00000258781 PURGQ9UJV8 347 aaKnown RBP23.57■■□□□ 1.36
CCM2-201ENST00000258781 OR5H14A6NHG9 310 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 TMEM210A6NLX4 147 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 ATP6V1G1O75348 118 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 HLA-GP17693 338 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 KITLGP21583 273 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 CALCRP30988 508 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 DCAF12L2Q5VW00 463 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 WDR86Q86TI4 376 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 FAM58AQ8N1B3 248 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 OR5M8Q8NGP6 311 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 POLDIP2Q9Y2S7 368 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 SNAPC5O75971 98 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 OR5H8P0DN80 308 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 SRSF7Q16629 238 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCM2-201ENST00000258781 LY6G6FQ5SQ64 297 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 ZNF660Q6AZW8 331 aaPredicted RBP23.56■■□□□ 1.36
CCM2-201ENST00000258781 Q8IYB0 196 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 ST6GALNAC3Q8NDV1 305 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 OR8G5Q8NG78 346 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 RTBDNQ9BSG5 229 aaPredicted RBP23.56■■□□□ 1.36
CCM2-201ENST00000258781 IL36RNQ9UBH0 155 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 ITGB1BP2Q9UKP3 347 aa23.56■■□□□ 1.36
CCM2-201ENST00000258781 PRR14LQ5THK1 2151 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 A0A0G2JNJ9 132 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 PPP3CBP16298 524 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 VAMP1P23763 118 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 IKZF1Q13422 519 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 OR8G1Q15617 311 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 Q6ZS49 121 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 TMEM230Q96A57 120 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 S100PBPQ96BU1 408 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 PIGMQ9H3S5 423 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 DECR2Q9NUI1 292 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 TMEM100Q9NV29 134 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 Q9UFV3 132 aa23.55■■□□□ 1.36
CCM2-201ENST00000258781 FAM221AA4D161 298 aa23.54■■□□□ 1.36
CCM2-201ENST00000258781 SRSF4Q08170 494 aaKnown RBP23.54■■□□□ 1.36
CCM2-201ENST00000258781 ZNF718Q3SXZ3 478 aa23.54■■□□□ 1.36
CCM2-201ENST00000258781 MBNL2Q5VZF2 373 aaKnown RBP23.54■■□□□ 1.36
CCM2-201ENST00000258781 SCCPDHQ8NBX0 429 aa23.54■■□□□ 1.36
CCM2-201ENST00000258781 WDR89Q96FK6 387 aaPredicted RBP23.54■■□□□ 1.36
CCM2-201ENST00000258781 ZNF488Q96MN9 340 aa23.54■■□□□ 1.36
CCM2-201ENST00000258781 DHRS9Q9BPW9 319 aa23.54■■□□□ 1.36
CCM2-201ENST00000258781 ZNF2Q9BSG1 426 aaPredicted RBP23.54■■□□□ 1.36
CCM2-201ENST00000258781 IFT22Q9H7X7 185 aa23.54■■□□□ 1.36
CCM2-201ENST00000258781 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.53■■□□□ 1.36
CCM2-201ENST00000258781 GLAP06280 429 aa23.53■■□□□ 1.36
CCM2-201ENST00000258781 LIN54Q6MZP7 749 aa23.53■■□□□ 1.36
CCM2-201ENST00000258781 SLC22A25Q6T423 547 aa23.53■■□□□ 1.36
CCM2-201ENST00000258781 DHRS11Q6UWP2 260 aa23.53■■□□□ 1.36
CCM2-201ENST00000258781 EPG5Q9HCE0 2579 aa23.53■■□□□ 1.36
CCM2-201ENST00000258781 RHBDL1O75783 438 aa23.53■■□□□ 1.36
CCM2-201ENST00000258781 NAAAQ02083 359 aa23.53■■□□□ 1.36
CCM2-201ENST00000258781 LGALSLQ3ZCW2 172 aaPredicted RBP23.53■■□□□ 1.36
CCM2-201ENST00000258781 GTF3AQ92664 365 aaKnown RBP23.53■■□□□ 1.36
CCM2-201ENST00000258781 MCRIP1C9JLW8 97 aa23.52■■□□□ 1.36
CCM2-201ENST00000258781 SFT2D2O95562 160 aa23.52■■□□□ 1.36
CCM2-201ENST00000258781 NAPSAO96009 420 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 310.4 ms