RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 MAGEB3O15480 346 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 OR2H2O95918 312 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 ARG1P05089 322 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 GNAO1P09471 354 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 ZNF44P15621 663 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 CAPGP40121 348 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 MEF2CQ06413 473 aaPredicted RBP17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 SRSF4Q08170 494 aaKnown RBP17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 MED21Q13503 144 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 LY6EQ16553 131 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 LRRC75BQ2VPJ9 315 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 CCDC58Q4VC31 144 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 KIAA2026Q5HYC2 2103 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 OGFRL1Q5TC84 451 aaPredicted RBP17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 CRIP3Q6Q6R5 217 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 SATL1Q86VE3 508 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 SAXO1Q8IYX7 474 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 C8orf59Q8N0T1 100 aaPredicted RBP17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 OR51A2Q8NGJ7 313 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 OR13D1Q8NGV5 346 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 GPR148Q8TDV2 347 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 TMEM80Q96HE8 168 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 AJUBAQ96IF1 538 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 GPER1Q99527 375 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 FAM192AQ9GZU8 254 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 SLITRK2Q9H156 845 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 SEBOXQ9HB31 216 aaPredicted RBP17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 CHCHD3Q9NX63 227 aaKnown RBP17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 CLEC2DQ9UHP7 191 aa17.19■□□□□ 0.34
HCFC1R1-201ENST00000248089 ALX3O95076 343 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 RBP4P02753 201 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 CD2P06729 351 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 IGHV1-8P0DP01 117 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 ZP1P60852 638 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 PLA1AQ53H76 456 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 CPNE2Q96FN4 548 aaPredicted RBP17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 PPA2Q9H2U2 334 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 RNF114Q9Y508 228 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 LINC00312Q9Y6C7 94 aa17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 SIRT4Q9Y6E7 314 aaPredicted RBP17.18■□□□□ 0.34
HCFC1R1-201ENST00000248089 P2RX3P56373 397 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 DYNC1I2Q13409 638 aaKnown RBP17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 BRICD5Q6PL45 260 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 Q6ZSV7 163 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 LHFPL4Q7Z7J7 247 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 ZFP41Q8N8Y5 198 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 LINC01006Q8NI28 216 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 RPS4Y2Q8TD47 263 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 TNFAIP8L1Q8WVP5 186 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 GGHQ92820 318 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 TMEM106AQ96A25 262 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 SMIM19Q96E16 107 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 NKX3-1Q99801 234 aaPredicted RBP17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 VCXQ9H320 206 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 RHOFQ9HBH0 211 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 BABAM2Q9NXR7 383 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 HSPE1-MOB4S4R3N1 261 aa17.17■□□□□ 0.34
HCFC1R1-201ENST00000248089 MGAM2Q2M2H8 2515 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 GABRPO00591 440 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 CASQ2O14958 399 aaPredicted RBP17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 CLPXO76031 633 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 LALBAP00709 142 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 TGFBR2P37173 567 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 PPP3R1P63098 170 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 ST3GAL4Q11206 333 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 ASPHD2Q6ICH7 369 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 OR13C5Q8NGS8 318 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 OR52N1Q8NH53 320 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 NR1H4Q96RI1 486 aaPredicted RBP17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 MEGF9Q9H1U4 602 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 ING3Q9NXR8 418 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 ZNF281Q9Y2X9 895 aa17.16■□□□□ 0.34
HCFC1R1-201ENST00000248089 OGG1O15527 345 aa17.15■□□□□ 0.34
HCFC1R1-201ENST00000248089 XPNPEP2O43895 674 aa17.15■□□□□ 0.34
HCFC1R1-201ENST00000248089 AESQ08117 197 aa17.15■□□□□ 0.34
HCFC1R1-201ENST00000248089 PRR31Q5SQ13 230 aa17.15■□□□□ 0.34
HCFC1R1-201ENST00000248089 ZNF529Q6P280 563 aa17.15■□□□□ 0.34
HCFC1R1-201ENST00000248089 AHSA2Q719I0 299 aa17.15■□□□□ 0.34
HCFC1R1-201ENST00000248089 SESN1Q9Y6P5 492 aa17.15■□□□□ 0.34
HCFC1R1-201ENST00000248089 TRGV10A0A0A0MS01 117 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 A0A0G2JK05 382 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 FUOMA2VDF0 154 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 EFCAB10A6NFE3 127 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 ODF3BA8MYP8 253 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 HSPB6O14558 160 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 DEGS1O15121 323 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 ERP29P30040 261 aaKnown RBP17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 MTNR1BP49286 362 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 ATXN7L3Q14CW9 347 aaPredicted RBP17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 ZNF626Q68DY1 528 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 Q6P435 159 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 OR10K1Q8NGX5 313 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 GHSRQ92847 366 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 FOXRED1Q96CU9 486 aaPredicted RBP17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 ORAI1Q96D31 301 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 ZNF696Q9H7X3 374 aa17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 UBE2J1Q9Y385 318 aaPredicted RBP17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 TBL2Q9Y4P3 447 aaKnown RBP17.14■□□□□ 0.33
HCFC1R1-201ENST00000248089 PNMA8CA0A1B0GUJ8 204 aa17.13■□□□□ 0.33
HCFC1R1-201ENST00000248089 SLC33A1O00400 549 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms