RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 RD3LP0DJH9 198 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 DTYMKP23919 212 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 NOVA1P51513 510 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 PIGPP57054 158 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 EIF2S3LQ2VIR3 472 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 ZNF468Q5VIY5 522 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 RTL6Q6ICC9 239 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 SLC16A13Q7RTY0 426 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 FNDC9Q8TBE3 224 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 ULBP2Q9BZM5 246 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 PLEKHJ1Q9NW61 149 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 NXT1Q9UKK6 140 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 A6NLC8 198 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 SYNGR3O43761 229 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 MSR1P21757 451 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 SPIN3Q5JUX0 258 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 SPSB3Q6PJ21 355 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 RSRP1Q9BUV0 290 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 PAPOLGQ9BWT3 736 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 MEMO1Q9Y316 297 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 RFNGQ9Y644 331 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 E5RGE8 158 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 M0R036 132 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 S100A6P06703 90 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 MTCP1P56278 107 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 ZNF561Q8N587 486 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 NANPQ8TBE9 248 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 PIGCQ92535 297 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 TINAGQ9UJW2 476 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 C14orf166Q9Y224 244 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 NSG2Q9Y328 171 aa10.35□□□□□ -0.75
SEC61A1-201ENST00000243253 A0A1W2PPH5 198 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 A0A1W2PR80 420 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 OR5H8P0DN80 308 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 DAOP14920 347 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 RAB5AP20339 215 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 NHLH2Q02577 135 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 ZNF616Q08AN1 781 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 SGPP2Q8IWX5 399 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 GJC3Q8NFK1 279 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 OR10AD1Q8NGE0 317 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 SYT3Q9BQG1 590 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 ZNF251Q9BRH9 671 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 FAM166BA8MTA8 275 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 GPR137BO60478 399 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 S100A8P05109 93 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 UCP3P55916 312 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 FAM76BQ5HYJ3 339 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 GPR157Q5UAW9 335 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 MRPL14Q6P1L8 145 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 LIAT1Q6ZQX7 453 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 PCED1AQ9H1Q7 454 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 FAM212BQ9NTI7 297 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 CACNA1BQ00975 2339 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 TNRC6AQ8NDV7 1962 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 NME2P1O60361 137 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 ZIC3O60481 467 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 CLN5O75503 358 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 RAB5BP61020 215 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 SWI5Q1ZZU3 235 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 WIPI1Q5MNZ9 446 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 HEPN1Q6WQI6 88 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 SLC22A8Q8TCC7 542 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 SPACA9Q96E40 222 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 BOD1Q96IK1 185 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 PRRG4Q9BZD6 226 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 SLC2A9Q9NRM0 540 aa10.34□□□□□ -0.75
SEC61A1-201ENST00000243253 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A0G2JMM0 328 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 IGHV5-10-1A0A0J9YXX1 117 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A1W2PPB8 328 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A1W2PRS3 328 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 KIR3DP1A8MWS1 328 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 CXCL13O43927 109 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 SULT1A1P50225 295 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 RPS23P62266 143 aaKnown RBP10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 ARL6IP1Q15041 203 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 Q8NFD4 153 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 IFI44Q8TCB0 444 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 TMEM171Q8WVE6 324 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 MOB3AQ96BX8 217 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 C19orf12Q9NSK7 152 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 IL36GQ9NZH8 169 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 TCFL5Q9UL49 500 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 TLX3O43711 291 aaPredicted RBP10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 OR7C1O76099 320 aaPredicted RBP10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 PPP1CCP36873 323 aaKnown RBP10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 POLR2GP62487 172 aaKnown RBP eCLIP10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 SLC35A1P78382 337 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 CCL20P78556 96 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF774Q6NX45 483 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 OR5L1Q8NGL2 311 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 PLPPR1Q8TBJ4 325 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 TP53RKQ96S44 253 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 COL6A6A6NMZ7 2263 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 ABCA4P78363 2273 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 hCG_1809904A0A1W2PP81 198 aa10.33□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A1W2PR64 198 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms