RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ZNF835Q9Y2P0 537 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 C3orf80F5H4A9 247 aa10.15□□□□□ -0.79
NOD1-201ENST00000222823 METTL15P1P0C7V9 234 aa10.15□□□□□ -0.79
NOD1-201ENST00000222823 TMIGD3P0DMS9 266 aaPredicted RBP10.15□□□□□ -0.79
NOD1-201ENST00000222823 Q3ZCU0 254 aa10.15□□□□□ -0.79
NOD1-201ENST00000222823 MIDNQ504T8 468 aa10.15□□□□□ -0.79
NOD1-201ENST00000222823 OR2M3Q8NG83 312 aa10.15□□□□□ -0.79
NOD1-201ENST00000222823 SNRNP200O75643 2136 aaKnown RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 TGOLN2O43493 480 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 COX7A2P2O60397 106 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 IGFBP7Q16270 282 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 PRSS54Q6PEW0 395 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 ZNF705AQ6ZN79 300 aaPredicted RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 ABHD3Q8WU67 409 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 ZNF501Q96CX3 271 aaPredicted RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 TM4SF19Q96DZ7 209 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 TMEM56Q96MV1 263 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 WDR54Q9H977 334 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 CACNG5Q9UF02 275 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 C4orf51C9J302 202 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 CHEK1O14757 476 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 GSTZ1O43708 216 aaPredicted RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 PTP4A3O75365 173 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 ACTL6AO96019 429 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 GABRA1P14867 456 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 F2RP25116 425 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 MDH2P40926 338 aaKnown RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 GNG10P50151 68 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 FOXL2P58012 376 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 TNFAIP6P98066 277 aaPredicted RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 ZXDAP98168 799 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 SLC26A10Q8NG04 563 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 PRSS27Q9BQR3 290 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 PECRQ9BY49 303 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 ZNF71Q9NQZ8 489 aaPredicted RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 SF3B6Q9Y3B4 125 aaKnown RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 PNLIPP16233 465 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 NTF3P20783 257 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 FABP9Q0Z7S8 132 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 PJVKQ0ZLH3 352 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 C3AR1Q16581 482 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 ZNF658BQ4V348 819 aaPredicted RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 C4orf17Q53FE4 359 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 MRGPRDQ8TDS7 321 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 ZNF721Q8TF20 911 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 CHAC2Q8WUX2 184 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 CXorf58Q96LI9 332 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 GLRX2Q9NS18 164 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 CYB5R1Q9UHQ9 305 aa10.14□□□□□ -0.79
NOD1-201ENST00000222823 FNDC1Q4ZHG4 1894 aaPredicted RBP10.14□□□□□ -0.79
NOD1-201ENST00000222823 FAM24AA6NFZ4 105 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 TBX6O95947 436 aaPredicted RBP10.13□□□□□ -0.79
NOD1-201ENST00000222823 CST2P09228 141 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 AKR1C3P42330 323 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 H3F3AP84243 136 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 FAHD2BQ6P2I3 314 aaPredicted RBP10.13□□□□□ -0.79
NOD1-201ENST00000222823 C10orf35Q96D05 121 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 FAHD2AQ96GK7 314 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 MAP6Q96JE9 813 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 NDFIP1Q9BT67 221 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 GPR27Q9NS67 375 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 WSB1Q9Y6I7 421 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 G3V3Q6 166 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 DNPH1O43598 174 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 ZNF17P17021 662 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 CEBPEQ15744 281 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 PRR27Q6MZM9 219 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 TRAT1Q6PIZ9 186 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 DGAT2L6Q6ZPD8 337 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 IGHV3-43A0A0B4J1X8 118 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 HMSDA8MTL9 139 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 SEMA7AO75326 666 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 LY86O95711 162 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 IGKV1D-16P01601 117 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 IGHV3-43DP0DP04 118 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 CTRB1P17538 263 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 SPINK2P20155 84 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 RPS4XP62701 263 aaKnown RBP10.13□□□□□ -0.79
NOD1-201ENST00000222823 COL19A1Q14993 1142 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 SURF2Q15527 256 aaPredicted RBP10.13□□□□□ -0.79
NOD1-201ENST00000222823 HFEQ30201 348 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 DCAF10Q5QP82 559 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 CTRB2Q6GPI1 263 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 UQCC3Q6UW78 93 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 SLC22A18ASQ8N1D0 253 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 ZNF561Q8N587 486 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 NTMQ9P121 344 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 PILRAQ9UKJ1 303 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 hADV38S2A0JD32 116 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 CTSDP07339 412 aaPredicted RBP10.13□□□□□ -0.79
NOD1-201ENST00000222823 FBP1P09467 338 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 LIFP15018 202 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 CPN1P15169 458 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 SLC38A11Q08AI6 406 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 CA5BP1Q8WTZ4 195 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 SDHCQ99643 169 aaPredicted RBP10.13□□□□□ -0.79
NOD1-201ENST00000222823 OR2D2Q9H210 308 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 BARX1Q9HBU1 254 aaPredicted RBP10.13□□□□□ -0.79
NOD1-201ENST00000222823 IL36GQ9NZH8 169 aa10.13□□□□□ -0.79
NOD1-201ENST00000222823 FBXL17Q9UF56 701 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms