RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 GNG7O60262 68 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 NDUFB6O95139 128 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 C11orf87Q6NUJ2 197 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 GLDNQ6ZMI3 551 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-201ENST00000219334 FOXS1O43638 330 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 B3GALNT1O75752 331 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 SP9P0CG40 484 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 PTHLHP12272 177 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 BLNKQ8WV28 456 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 MS4A7Q9GZW8 240 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-201ENST00000219334 WDR13Q9H1Z4 485 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 ZDHHC11Q9H8X9 412 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 PLSCR3Q9NRY6 295 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 SMCHD1A6NHR9 2005 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 NKX2-8O15522 239 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 STARD6P59095 220 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 CLEC12BQ2HXU8 276 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 TCTE3Q8IZS6 198 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 ORM2P19652 201 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 MRM2Q9UI43 246 aaKnown RBP16.69■□□□□ 0.26
SMPD3-201ENST00000219334 TRDCB7Z8K6 153 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 SPINK2P20155 84 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 FA2HQ7L5A8 372 aa16.69■□□□□ 0.26
SMPD3-201ENST00000219334 ATP6V1G2-DDX39BF2Z307 99 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 SOX15O60248 233 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 SLC24A4Q8NFF2 622 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 R3HDM4Q96D70 268 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 GPR137Q96N19 417 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 SLC52A3Q9NQ40 469 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 SLC2A8Q9NY64 477 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 DOK5Q9P104 306 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 LPAR3Q9UBY5 353 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 TMEM210A6NLX4 147 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 TXNDC12O95881 172 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 CCDC144NLQ6NUI1 221 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 C11orf42Q8N5U0 333 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 POMT1Q9Y6A1 747 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 ARL2-SNX15V9GYD0 113 aa16.68■□□□□ 0.26
SMPD3-201ENST00000219334 ADRB1P08588 477 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 PPIAL4EA0A075B759 164 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 PPIAL4DF5H284 164 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 TCAPO15273 167 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 PPIAL4FP0DN26 164 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 AMTP48728 403 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 DOLPP1Q86YN1 238 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 PPIAL4AQ9Y536 164 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 TRPM6Q9BX84 2022 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 PRSS44E7EML9 344 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 COL13A1Q5TAT6 717 aaPredicted RBP16.67■□□□□ 0.26
SMPD3-201ENST00000219334 LIAT1Q6ZQX7 453 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 MDP1Q86V88 176 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 C1orf174Q8IYL3 243 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 TEX29Q8N6K0 151 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 C17orf47Q8NEP4 570 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 OR5C1Q8NGR4 320 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 DYNLRB2Q8TF09 96 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 DIRC2Q96SL1 478 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 SPAG17Q6Q759 2223 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 GAMTQ14353 236 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 KCNMB1Q16558 191 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 OR8D4Q8NGM9 314 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 PCGF1Q9BSM1 259 aa16.67■□□□□ 0.26
SMPD3-201ENST00000219334 CST4P01036 141 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 ATP6V1FQ16864 119 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 OR5A2Q8NGI9 324 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 ZNF721Q8TF20 911 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 ATP5SQ99766 215 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 TMPRSS5Q9H3S3 457 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 MSL2Q9HCI7 577 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 LOC102723971A0A1B0GUV8 181 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 BCL3P20749 454 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 HOXA4Q00056 320 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-201ENST00000219334 PDZD11Q5EBL8 140 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 MUC20Q8N307 709 aaPredicted RBP16.66■□□□□ 0.26
SMPD3-201ENST00000219334 FER1L6Q2WGJ9 1857 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 TRIM77I1YAP6 450 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 OR5AC1P0C628 307 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 P2RY6Q15077 328 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 SH2D2AQ9NP31 389 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 PPP1R1AQ13522 171 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 AHRRA9YTQ3 701 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 PMELP40967 661 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 GGNBP1Q5YKI7 109 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 RSRP1Q9BUV0 290 aa16.66■□□□□ 0.26
SMPD3-201ENST00000219334 CDC20Q12834 499 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 INSL4Q14641 139 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-201ENST00000219334 FLYWCH2Q96CP2 140 aaKnown RBP16.65■□□□□ 0.26
SMPD3-201ENST00000219334 RNF2Q99496 336 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 CCDC190Q86UF4 302 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 STARD10Q9Y365 291 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 CRYBB2P43320 205 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 NAAAQ02083 359 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 DHRS2Q13268 280 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 ZAR1Q86SH2 424 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 OR1B1Q8NGR6 318 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 PILRBQ9UKJ0 227 aa16.65■□□□□ 0.26
SMPD3-201ENST00000219334 HSBP1O75506 76 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms