RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OPN3Q9H1Y3 402 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-234ENST00000642041 NOX3Q9HBY0 568 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF503-AS2A6NEH8 195 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 TRAPPC2LH3BP13 241 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 HTR3BO95264 441 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 RAB3DO95716 219 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 IFNA6P05013 189 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 KITLGP21583 273 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 GIFP27352 417 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 BLVRBP30043 206 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-234ENST00000642041 WNT5AP41221 380 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 IL24Q13007 206 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 ARFRP1Q13795 201 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 C11orf91Q3C1V1 193 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 METTL11BQ5VVY1 283 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 MBNL2Q5VZF2 373 aaKnown RBP14.68□□□□□ -0.06
PHGDH-234ENST00000642041 FIP1L1Q6UN15 594 aaKnown RBP14.68□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF782Q6ZMW2 699 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-234ENST00000642041 ARRDC1Q8N5I2 433 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 OR1J1Q8NGS3 322 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 OR8S1Q8NH09 359 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 OR5P3Q8WZ94 311 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 RNF170Q96K19 258 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 Q96M66 194 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 TRAF4Q9BUZ4 470 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-234ENST00000642041 RIMS4Q9H426 269 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-234ENST00000642041 PLEKHJ1Q9NW61 149 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 ING3Q9NXR8 418 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 SLC2A8Q9NY64 477 aa14.68□□□□□ -0.06
PHGDH-234ENST00000642041 ABCA1O95477 2261 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 C5orf63A6NC05 138 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 C16orf97H3BN30 126 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 PEX14O75381 377 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 NDUFB6O95139 128 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 NGFP01138 241 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 IL5P05113 134 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 SERPINA2P20848 420 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 SRP9P49458 86 aaKnown RBP14.67□□□□□ -0.06
PHGDH-234ENST00000642041 SORDQ00796 357 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 KRTAP1-1Q07627 177 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 SRSF7Q16629 238 aaKnown RBP eCLIP14.67□□□□□ -0.06
PHGDH-234ENST00000642041 TATDN3Q17R31 274 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 RNASE10Q5GAN6 216 aaKnown RBP14.67□□□□□ -0.06
PHGDH-234ENST00000642041 FAM76BQ5HYJ3 339 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 DTX3Q8N9I9 347 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 ASB13Q8WXK3 278 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 GTF3AQ92664 365 aaKnown RBP14.67□□□□□ -0.06
PHGDH-234ENST00000642041 CMBLQ96DG6 245 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 NEURL2Q9BR09 285 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 TMEM100Q9NV29 134 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 MCUBQ9NWR8 336 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 ANAPC10Q9UM13 185 aa14.67□□□□□ -0.06
PHGDH-234ENST00000642041 LRP5LA4QPB2 252 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 SNRPGP15A8MWD9 76 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 MFNGO00587 321 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 PHF1O43189 567 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-234ENST00000642041 SPNP16150 400 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 DTYMKP23919 212 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 MADCAM1Q13477 382 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 IL13RA2Q14627 380 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 GRK1Q15835 563 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 OR10K2Q6IF99 312 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 TRAPPC6BQ86SZ2 158 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF611Q8N823 705 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 OR13G1Q8NGZ3 307 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 SPACA5Q96QH8 159 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 MMP28Q9H239 520 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 MYOZ1Q9NP98 299 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-234ENST00000642041 JKAMPQ9P055 326 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 GLS2Q9UI32 602 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 GPR160Q9UJ42 338 aa14.66□□□□□ -0.06
PHGDH-234ENST00000642041 C7orf66A4D0T2 115 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF732B4DXR9 585 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 J3QT63 122 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 CCNKO75909 580 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 CCL2P13500 99 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 FUT3P21217 361 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 PTAFRP25105 342 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 GLRXP35754 106 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 FGF12P61328 243 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 RBM39Q14498 530 aaKnown RBP14.65□□□□□ -0.06
PHGDH-234ENST00000642041 VAX1Q5SQQ9 334 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 CD276Q5ZPR3 534 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 C11orf88Q6PI97 169 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF474Q6S9Z5 364 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-234ENST00000642041 CELF2-AS1Q8N7Q2 184 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 TMEM104Q8NE00 496 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 OR8G5Q8NG78 346 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 NPRL2Q8WTW4 380 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 PERPQ96FX8 193 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 MS4A3Q96HJ5 214 aa14.65□□□□□ -0.06
PHGDH-234ENST00000642041 UBE2QL1A1L167 161 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 TMEM235A6NFC5 223 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 FOXI3A8MTJ6 420 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-234ENST00000642041 FCER2P06734 321 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 CECR9P0C854 216 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 BTCP35070 178 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 HAAOP46952 286 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 TMEM50BP56557 158 aa14.64□□□□□ -0.07
PHGDH-234ENST00000642041 RGS7BPQ6MZT1 257 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms