RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TMPRSS2O15393 492 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 HAND1O96004 215 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 GYPAP02724 150 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 CHRM2P08172 466 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 CFPP27918 469 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 NPBWR2P48146 333 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 PITPNBP48739 271 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 RBM11P57052 281 aaKnown RBP10.89□□□□□ -0.67
PHGDH-218ENST00000641491 ARL6IP1Q15041 203 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 MPV17LQ2QL34 196 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 SPRNQ5BIV9 151 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 LRRC10Q5BKY1 277 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 ELP2Q6IA86 826 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 RAB12Q6IQ22 244 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM185AQ8NFB2 350 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 DYNC2LI1Q8TCX1 351 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
PHGDH-218ENST00000641491 MED30Q96HR3 178 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 GFI1Q99684 422 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 ZNF665Q9H7R5 613 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 MIOXQ9UGB7 285 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 SPATA2Q9UM82 520 aa10.89□□□□□ -0.67
PHGDH-218ENST00000641491 A0A0G2JK05 382 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM272A0A1B0GTI8 110 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FUOMA2VDF0 154 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A10PA6NDY2 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A18PA6NE21 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A16PA6NEW6 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 A6NHS1 94 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A20PA6NIJ5 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A8PA6NJQ4 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A7PA6NKC0 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 RFPL4AA6NLU0 287 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A22PA8MWA6 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A12PA8MX19 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A5PA8MXJ8 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A23PA8MXZ1 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 RFPL4AL1F8VTS6 287 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 SIRPB1O00241 398 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 ADAM20O43506 726 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 NDUFB3O43676 98 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 SFTPBP07988 381 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 ROS1P08922 2347 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A15PP0C7V4 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A13PP0C7W8 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A14PP0C7W9 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 FAM90A24PP0C7X0 464 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 VSIG8P0DPA2 414 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 EGR1P18146 543 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 PMELP40967 661 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 MNDAP41218 407 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 RPS27AP62979 156 aaKnown RBP10.88□□□□□ -0.67
PHGDH-218ENST00000641491 IL13RA1P78552 427 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 RBM39Q14498 530 aaKnown RBP10.88□□□□□ -0.67
PHGDH-218ENST00000641491 PIGYQ3MUY2 71 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 TMEM155Q4W5P6 130 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 PAN3Q58A45 887 aaKnown RBP10.88□□□□□ -0.67
PHGDH-218ENST00000641491 TEX36Q5VZQ5 186 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 DCDC5Q6ZRR9 648 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 C19orf18Q8NEA5 215 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 RAB40AQ8WXH6 277 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 PTX4Q96A99 478 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 DNTTIP1Q9H147 329 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 WDR13Q9H1Z4 485 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 CHMP1AQ9HD42 196 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-218ENST00000641491 PLEKHJ1Q9NW61 149 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 RHBDL2Q9NX52 303 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 OR5V1Q9UGF6 321 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 PEX16Q9Y5Y5 336 aa10.88□□□□□ -0.67
PHGDH-218ENST00000641491 A0A0B4J203 849 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 IGKV1-12A0A0C4DH73 117 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 MCRIP1C9JLW8 97 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 RP2O75695 350 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 PAHP00439 452 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 LHBP01229 141 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 IGKV1D-12P01611 117 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 NDUFB7P17568 137 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 DUSP1P28562 367 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 PRDX2P32119 198 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 VEGFCP49767 419 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 ZMYND11Q15326 602 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 TAF9Q16594 264 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 ESCO2Q56NI9 601 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 FAM201AQ5SY85 155 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 OR10K2Q6IF99 312 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 PRSS57Q6UWY2 283 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 ASCL4Q6XD76 172 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 GDPD3Q7L5L3 318 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 RNF144BQ7Z419 303 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 C1QL2Q7Z5L3 287 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 ZNF561Q8N587 486 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 OR5T2Q8NGG2 359 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 CMTM3Q96MX0 182 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 BPESC1Q9GZL8 116 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 MMP27Q9H306 513 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 HES4Q9HCC6 221 aa10.87□□□□□ -0.67
PHGDH-218ENST00000641491 DSCAMO60469 2012 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms