RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GLSO94925 669 aaPredicted RBP10.02□□□□□ -0.8
CLN6-217ENST00000636964 GRB2P62993 217 aaKnown RBP10.02□□□□□ -0.8
CLN6-217ENST00000636964 MRPS34P82930 218 aaKnown RBP10.02□□□□□ -0.8
CLN6-217ENST00000636964 MST1LQ2TV78 715 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 FAM27BQ5VT28 67 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 ZNF774Q6NX45 483 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 UNQ6494/PRO21346Q6UXR6 183 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 TNFAIP8L1Q8WVP5 186 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 ZNF471Q9BX82 626 aaPredicted RBP10.02□□□□□ -0.8
CLN6-217ENST00000636964 TMEM138Q9NPI0 162 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 DLL3Q9NYJ7 618 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 FAM96BQ9Y3D0 163 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 CEP295Q9C0D2 2601 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 TRAV18A0A075B6X5 111 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 CCSO14618 274 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 CTAG2O75638 210 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 WISP2O76076 250 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 IFNA10P01566 189 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 CD8AP01732 235 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 FOLR2P14207 255 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 ZNF20P17024 532 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 FSTP19883 344 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 NBL1P41271 181 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 ATXN7L3Q14CW9 347 aaPredicted RBP10.02□□□□□ -0.81
CLN6-217ENST00000636964 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 DEFB109BQ30KR1 87 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 LRRC37A5PQ49AS3 106 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 FAM166AQ6J272 317 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 FOXL2NBQ6ZUU3 175 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 PAQR4Q8N4S7 273 aaPredicted RBP10.02□□□□□ -0.81
CLN6-217ENST00000636964 OR10A7Q8NGE5 316 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 HAS2Q92819 552 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 FOXB1Q99853 325 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 MRI1Q9BV20 369 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 CNTD2Q9H8S5 307 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 ZMAT3Q9HA38 289 aaKnown RBP10.02□□□□□ -0.81
CLN6-217ENST00000636964 TMEM38BQ9NVV0 291 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 LOC100289279A0A1B0GTE1 492 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 B9A039 149 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 ACOT7O00154 380 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 PPT1P50897 306 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 FOXG1P55316 489 aaPredicted RBP10.02□□□□□ -0.81
CLN6-217ENST00000636964 MRPS11P82912 194 aaKnown RBP10.02□□□□□ -0.81
CLN6-217ENST00000636964 RBM39Q14498 530 aaKnown RBP10.02□□□□□ -0.81
CLN6-217ENST00000636964 UNQ6126/PRO20091Q6UXV3 157 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 ZFP62Q8NB50 900 aaPredicted RBP10.02□□□□□ -0.81
CLN6-217ENST00000636964 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 FAM46BQ96A09 425 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 EGLN1Q9GZT9 426 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 GPR35Q9HC97 309 aa10.02□□□□□ -0.81
CLN6-217ENST00000636964 OR5H14A6NHG9 310 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 SYNGR4O95473 234 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 OR8U8P0C7N1 319 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 CD79AP11912 226 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 ZNF32P17041 273 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 PRRX1P54821 245 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 CLEC9AQ6UXN8 241 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 SELENOHQ8IZQ5 122 aaKnown RBP10.01□□□□□ -0.81
CLN6-217ENST00000636964 NPRL2Q8WTW4 380 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 LYZL4Q96KX0 146 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 TMEM208Q9BTX3 173 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 COL25A1Q9BXS0 654 aaPredicted RBP10.01□□□□□ -0.81
CLN6-217ENST00000636964 POFUT1Q9H488 388 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 SLC7A10Q9NS82 523 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 A0A096LPE4 126 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 A0A0D9SG52 128 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 A0A1W2PPZ6 126 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 MEGF11A6BM72 1044 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 H7C417 338 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 M0R135 149 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 CYB5R3P00387 301 aaPredicted RBP10.01□□□□□ -0.81
CLN6-217ENST00000636964 CEACAM1P13688 526 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 HTD2P86397 168 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 ANKRD16Q6P6B7 361 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 ZNF627Q7L945 461 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 ACBD4Q8NC06 268 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 CPT1CQ8TCG5 803 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 ZNF799Q96GE5 643 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 TOLLIPQ9H0E2 274 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 MTFP1Q9UDX5 166 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 NBEAQ8NFP9 2946 aa10.01□□□□□ -0.81
CLN6-217ENST00000636964 C9JQL5 133 aa10□□□□□ -0.81
CLN6-217ENST00000636964 TM4SF5O14894 197 aa10□□□□□ -0.81
CLN6-217ENST00000636964 XRCC3O43542 346 aa10□□□□□ -0.81
CLN6-217ENST00000636964 AKR1C3P42330 323 aa10□□□□□ -0.81
CLN6-217ENST00000636964 TNFSF10P50591 281 aa10□□□□□ -0.81
CLN6-217ENST00000636964 ATP1B3P54709 279 aa10□□□□□ -0.81
CLN6-217ENST00000636964 SOX8P57073 446 aa10□□□□□ -0.81
CLN6-217ENST00000636964 SNAI3Q3KNW1 292 aa10□□□□□ -0.81
CLN6-217ENST00000636964 ATPAF1Q5TC12 328 aaPredicted RBP10□□□□□ -0.81
CLN6-217ENST00000636964 SKA3Q8IX90 412 aa10□□□□□ -0.81
CLN6-217ENST00000636964 SLC22A24Q8N4F4 322 aa10□□□□□ -0.81
CLN6-217ENST00000636964 OR2AE1Q8NHA4 323 aa10□□□□□ -0.81
CLN6-217ENST00000636964 ZNF596Q8TC21 504 aa10□□□□□ -0.81
CLN6-217ENST00000636964 SEC22AQ96IW7 307 aa10□□□□□ -0.81
CLN6-217ENST00000636964 TMPRSS5Q9H3S3 457 aa10□□□□□ -0.81
CLN6-217ENST00000636964 MOB1AQ9H8S9 216 aa10□□□□□ -0.81
CLN6-217ENST00000636964 MCTS1Q9ULC4 181 aaKnown RBP10□□□□□ -0.81
CLN6-217ENST00000636964 GGT3PA6NGU5 568 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms