RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 VMO1Q7Z5L0 202 aa13.77□□□□□ -0.21
UBE3D-208ENST00000626828 ZFP41Q8N8Y5 198 aa13.77□□□□□ -0.21
UBE3D-208ENST00000626828 ZDHHC22Q8N966 263 aa13.77□□□□□ -0.21
UBE3D-208ENST00000626828 ASCC1Q8N9N2 400 aaKnown RBP13.77□□□□□ -0.21
UBE3D-208ENST00000626828 FAM216AQ8WUB2 273 aa13.77□□□□□ -0.21
UBE3D-208ENST00000626828 PRDM13Q9H4Q3 707 aa13.77□□□□□ -0.21
UBE3D-208ENST00000626828 ELL3Q9HB65 397 aaPredicted RBP13.77□□□□□ -0.21
UBE3D-208ENST00000626828 HMG20AQ9NP66 347 aa13.77□□□□□ -0.21
UBE3D-208ENST00000626828 RBFOX1Q9NWB1 397 aaKnown RBP13.77□□□□□ -0.21
UBE3D-208ENST00000626828 STAB1Q9NY15 2570 aa13.77□□□□□ -0.21
UBE3D-208ENST00000626828 IGKV1-12A0A0C4DH73 117 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 TRBV5-5A0A0J9YX44 114 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 ZNF737O75373 536 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 GPX5O75715 221 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 HAND1O96004 215 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 IGKV1D-12P01611 117 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 PRKACAP17612 351 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 CELP19835 753 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 PRTN3P24158 256 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 BDH1Q02338 343 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 GUCA2AQ02747 115 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 ACSM1Q08AH1 577 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 BAMBIQ13145 260 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 TMEM200BQ69YZ2 307 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 CRIP3Q6Q6R5 217 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 SATL1Q86VE3 508 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 FAM185AQ8N0U4 392 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 Q8N7P7 452 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 OR5D18Q8NGL1 313 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 PPP1R35Q8TAP8 253 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 ZDHHC16Q969W1 377 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 ZNF48Q96MX3 618 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-208ENST00000626828 GPER1Q99527 375 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 MND1Q9BWT6 205 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 DUSP21Q9H596 190 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 METTL8Q9H825 291 aaKnown RBP13.76□□□□□ -0.21
UBE3D-208ENST00000626828 UNKLQ9H9P5 680 aaKnown RBP13.76□□□□□ -0.21
UBE3D-208ENST00000626828 TMEM138Q9NPI0 162 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 TAS2R4Q9NYW5 299 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 KIAA2026Q5HYC2 2103 aa13.76□□□□□ -0.21
UBE3D-208ENST00000626828 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 A0A1W2PR64 198 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 DUSP1P28562 367 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 BMXP51813 675 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 ZP1P60852 638 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBE3D-208ENST00000626828 PPP3R1P63098 170 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 SLC35A2P78381 396 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 GDPD3Q7L5L3 318 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 PXT1Q8NFP0 134 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 OR4M1Q8NGD0 313 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 PGLYRP3Q96LB9 341 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 NOX4Q9NPH5 578 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 ESM1Q9NQ30 184 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 SIRT7Q9NRC8 400 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 C19orf12Q9NSK7 152 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 CKLFQ9UBR5 152 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 RAB26Q9ULW5 256 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 GSTK1Q9Y2Q3 226 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 SOX21Q9Y651 276 aaPredicted RBP13.75□□□□□ -0.21
UBE3D-208ENST00000626828 DSCAML1Q8TD84 2053 aa13.75□□□□□ -0.21
UBE3D-208ENST00000626828 TMEM82A0PJX8 343 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 CALCBP10092 127 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 EEF1B2P24534 225 aaKnown RBP13.74□□□□□ -0.21
UBE3D-208ENST00000626828 BDKRB2P30411 391 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 TGFBR2P37173 567 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 VHLP40337 213 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 UBA52P62987 128 aaKnown RBP13.74□□□□□ -0.21
UBE3D-208ENST00000626828 SPHARQ15513 63 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 DEFB112Q30KQ8 113 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 RUSC1-AS1Q66K80 236 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 NCR3LG1Q68D85 454 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 ASPHD2Q6ICH7 369 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 C17orf107Q6ZR85 190 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 OR8H2Q8N162 312 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 OR52N4Q8NGI2 321 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 OR51A2Q8NGJ7 313 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 OR13C5Q8NGS8 318 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 THRSPQ92748 146 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 TNFRSF14Q92956 283 aa13.74□□□□□ -0.21
UBE3D-208ENST00000626828 ZMAT3Q9HA38 289 aaKnown RBP13.74□□□□□ -0.21
UBE3D-208ENST00000626828 PNMA8CA0A1B0GUJ8 204 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 CLDN34H7C241 214 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 RGS10O43665 173 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 IGFBP3P17936 291 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-208ENST00000626828 GABRR1P24046 479 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 LMO1P25800 156 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 ZNF93P35789 620 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-208ENST00000626828 PTGFRP43088 359 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 MTNR1BP49286 362 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 UBE2E1P51965 193 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 MEF2CQ06413 473 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-208ENST00000626828 GPR50Q13585 617 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 IRF3Q14653 427 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 ELP2Q6IA86 826 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 ASCL4Q6XD76 172 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 PDZD9Q8IXQ8 264 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 MS4A15Q8N5U1 240 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms