RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 FGF12P61328 243 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 MLLT11Q13015 90 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 DDI2Q5TDH0 399 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 ELP2Q6IA86 826 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 METAP1DQ6UB28 335 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 GDPD3Q7L5L3 318 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 ASCC1Q8N9N2 400 aaKnown RBP11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 ZNRF1Q8ND25 227 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 ZFAND2BQ8WV99 257 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 TMEM158Q8WZ71 300 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 SNX22Q96L94 193 aa11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 MS4A7Q9GZW8 240 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 ZMAT3Q9HA38 289 aaKnown RBP11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 LSM2Q9Y333 95 aaKnown RBP11.58□□□□□ -0.56
SNRPA1-216ENST00000626000 TRBV5-7A0A0A0MS05 114 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 H3BUI4 141 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 SPRY1O43609 319 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 HAND1O96004 215 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 PRKACAP17612 351 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 IGFBP3P17936 291 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 ZP1P60852 638 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 RPS11P62280 158 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 RPL31P62899 125 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 TPBGQ13641 420 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 ZNF367Q7RTV3 350 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 SATL1Q86VE3 508 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 OR8H2Q8N162 312 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 CD177Q8N6Q3 437 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 ZFP41Q8N8Y5 198 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 TNFAIP8L1Q8WVP5 186 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 FOXRED1Q96CU9 486 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 DERL3Q96Q80 235 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 PCGF1Q9BSM1 259 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 SIRPDQ9H106 197 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 SLITRK2Q9H156 845 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 METTL8Q9H825 291 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 EXOSC4Q9NPD3 245 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 IL36GQ9NZH8 169 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
SNRPA1-216ENST00000626000 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 PNMA8CA0A1B0GUJ8 204 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 GABRPO00591 440 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 ARL6IP5O75915 188 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 RBP4P02753 201 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 CSTBP04080 98 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 BCL3P20749 454 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 TGFBR2P37173 567 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 PTGFRP43088 359 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 COL10A1Q03692 680 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 MEF2CQ06413 473 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 RSU1Q15404 277 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 LINC00596Q86U02 117 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 OR51A2Q8NGJ7 313 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 OR5D18Q8NGL1 313 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 RFT1Q96AA3 541 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 MRPS24Q96EL2 167 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 UQCC2Q9BRT2 126 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 FAM192AQ9GZU8 254 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 METTL9Q9H1A3 318 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 UNKLQ9H9P5 680 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 TCF7L1Q9HCS4 588 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 RBFOX1Q9NWB1 397 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 GHRLQ9UBU3 117 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 MXRA5Q9NR99 2828 aa11.56□□□□□ -0.56
SNRPA1-216ENST00000626000 A0A1B0GW55 424 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 hADV38S2A0JD32 116 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 MGST3O14880 152 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 ANGPTL7O43827 346 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 ZNF737O75373 536 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 INMTO95050 263 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 CSN2P05814 226 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4L2P0CJ85 424 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4L3P0CJ86 424 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4L4P0CJ87 422 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4L5P0CJ88 424 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4L6P0CJ89 424 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4L7P0CJ90 424 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 MMP9P14780 707 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 CPEP16870 476 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 ERP29P30040 261 aaKnown RBP11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 NPBWR2P48146 333 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 KCNJ3P48549 501 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 HILS1P60008 231 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 ARF6P62330 175 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 IL13RA2Q14627 380 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 ACSM3Q53FZ2 586 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 NHLRC3Q5JS37 347 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 ASCL4Q6XD76 172 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 FAM185AQ8N0U4 392 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 Q8NFD4 153 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 OR52N4Q8NGI2 321 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 SPACA5Q96QH8 159 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 OR5M11Q96RB7 305 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 MGLLQ99685 303 aa11.55□□□□□ -0.56
SNRPA1-216ENST00000626000 ELL3Q9HB65 397 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms