RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 AESQ08117 197 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 VMA21Q3ZAQ7 101 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 FAM201AQ5SY85 155 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 CDC20BQ86Y33 519 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 TGIF2LYQ8IUE0 185 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 TGIF2LXQ8IUE1 241 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 PRSS35Q8N3Z0 413 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 MAPK1IP1LQ8NDC0 245 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 DUS3LQ96G46 650 aaKnown RBP7.84□□□□□ -1.15
HDAC9-229ENST00000622668 FAAP24Q9BTP7 215 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 PLCXD1Q9NUJ7 323 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 METRNQ9UJH8 293 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 LHFPL6Q9Y693 200 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 USP9XQ93008 2570 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-229ENST00000622668 ZSCAN5BA6NJL1 495 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 NXPH3O95157 252 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 ONECUT2O95948 504 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 LIMS3P0CW19 117 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 LIMS4P0CW20 117 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 OR5H8P0DN80 308 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 NFYAP23511 347 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-229ENST00000622668 ZBTB25P24278 435 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 CEACAM6P40199 344 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 FAM209AQ5JX71 171 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 GGNQ86UU5 652 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 RASL11BQ9BPW5 248 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 SUCNR1Q9BXA5 334 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 CDCA4Q9BXL8 241 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 IGLV3-32A0A0A0MS00 114 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 C17orf100A8MU93 164 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 IFNL4K9M1U5 179 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 MDH2P40926 338 aaKnown RBP7.84□□□□□ -1.15
HDAC9-229ENST00000622668 REG1BP48304 166 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 FABP5Q01469 135 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 ABLIM2Q6H8Q1 611 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 C6orf201Q7Z4U5 140 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 GRPEL2Q8TAA5 225 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 MRPL24Q96A35 216 aaKnown RBP7.84□□□□□ -1.15
HDAC9-229ENST00000622668 VOPP1Q96AW1 172 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 UPRTQ96BW1 309 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 ZNF2Q9BSG1 426 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-229ENST00000622668 PLEKHA3Q9HB20 300 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 RABL2AQ9UBK7 228 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-229ENST00000622668 RABL2BQ9UNT1 228 aa7.84□□□□□ -1.15
HDAC9-229ENST00000622668 TMEM200CA6NKL6 621 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF716A6NP11 495 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 ARPC1BO15143 372 aaKnown RBP7.83□□□□□ -1.16
HDAC9-229ENST00000622668 PDCD6O75340 191 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 TOXO94900 526 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 THBDP07204 575 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 BCL3P20749 454 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 TAS2R31P59538 309 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 AKR1C1Q04828 323 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 PRSS45Q7RTY3 260 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 TMEM246Q9BRR3 403 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 GPR37O15354 613 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 MT-ND4P03905 459 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 ARG1P05089 322 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 GZMKP49863 264 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 SNAI3Q3KNW1 292 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 ZNF474Q6S9Z5 364 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-229ENST00000622668 WBP1Q96G27 269 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 DMRTB1Q96MA1 342 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 RBFOX1Q9NWB1 397 aaKnown RBP7.83□□□□□ -1.16
HDAC9-229ENST00000622668 RDH8Q9NYR8 311 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 IGLV1-36A0A0B4J1U3 117 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 A0A1W2PPE3 182 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 SLC17A2O00624 439 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 FABP7O15540 132 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 EFNA2O43921 213 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 LY6HO94772 140 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 GZMHP20718 246 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 TMEM33P57088 247 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 MRPS11P82912 194 aaKnown RBP7.83□□□□□ -1.16
HDAC9-229ENST00000622668 SSX2Q16385 188 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 Q3ZCU0 254 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 SLC25A53Q5H9E4 307 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 STEAP1BQ6NZ63 245 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 MRPL37Q9BZE1 423 aaKnown RBP7.83□□□□□ -1.16
HDAC9-229ENST00000622668 NAA50Q9GZZ1 169 aaKnown RBP7.83□□□□□ -1.16
HDAC9-229ENST00000622668 DUSP21Q9H596 190 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 HES4Q9HCC6 221 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 MTORP42345 2549 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 HMX3A6NHT5 357 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 COX5BP10606 129 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 CDONQ4KMG0 1287 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 Q5PR19 223 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 SYT6Q5T7P8 510 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-229ENST00000622668 STX12Q86Y82 276 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 WDFY1Q8IWB7 410 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 OR10R2Q8NGX6 335 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 AMELYQ99218 206 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 IL36GQ9NZH8 169 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 DKK4Q9UBT3 224 aa7.83□□□□□ -1.16
HDAC9-229ENST00000622668 KANTRA0A1W2PQU2 76 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 HLA-AP01891 365 aaKnown RBP7.82□□□□□ -1.16
HDAC9-229ENST00000622668 GDNFP39905 211 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 COL10A1Q03692 680 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 MMDQ15546 238 aa7.82□□□□□ -1.16
HDAC9-229ENST00000622668 SHEQ5VZ18 495 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms