RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 OR52A5Q9H2C5 316 aa2.7□□□□□ -1.98
CPNE3-213ENST00000622183 METTL8Q9H825 291 aaKnown RBP2.7□□□□□ -1.98
CPNE3-213ENST00000622183 OR2S2Q9NQN1 319 aa2.7□□□□□ -1.98
CPNE3-213ENST00000622183 DIABLOQ9NR28 239 aa2.7□□□□□ -1.98
CPNE3-213ENST00000622183 ZNHIT6Q9NWK9 470 aaKnown RBP2.7□□□□□ -1.98
CPNE3-213ENST00000622183 HMGXB4Q9UGU5 601 aa2.7□□□□□ -1.98
CPNE3-213ENST00000622183 USH1CQ9Y6N9 552 aa2.7□□□□□ -1.98
CPNE3-213ENST00000622183 SMARCA2P51531 1590 aa2.7□□□□□ -1.98
CPNE3-213ENST00000622183 A0A1B0GXF2 115 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 RBFOX3A6NFN3 312 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 ZNF233A6NK53 670 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-213ENST00000622183 CDIPTO14735 213 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 SHOX2O60902 331 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-213ENST00000622183 S100A5P33763 92 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 MAGEA3P43357 314 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 TUFMP49411 452 aaKnown RBP2.69□□□□□ -1.98
CPNE3-213ENST00000622183 TTPAP49638 278 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 GDI2P50395 445 aaKnown RBP2.69□□□□□ -1.98
CPNE3-213ENST00000622183 SSX1Q16384 188 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 PRR9Q5T870 116 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 TBPL2Q6SJ96 375 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 AHSA2Q719I0 299 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 DAZ4Q86SG3 579 aaKnown RBP2.69□□□□□ -1.98
CPNE3-213ENST00000622183 NELFBQ8WX92 580 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 LRRC45Q96CN5 670 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 ZMYND19Q96E35 227 aaPredicted RBP2.69□□□□□ -1.98
CPNE3-213ENST00000622183 BIRC8Q96P09 236 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 CATSPER2Q96P56 530 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 PEBP4Q96S96 227 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 ACBD6Q9BR61 282 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 THTPAQ9BU02 230 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 DAZ1Q9NQZ3 744 aaKnown RBP2.69□□□□□ -1.98
CPNE3-213ENST00000622183 TAC3Q9UHF0 121 aa2.69□□□□□ -1.98
CPNE3-213ENST00000622183 IZUMO1RA6ND01 250 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 GOLGA6L4A6NEF3 574 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 POLR3GO15318 223 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-213ENST00000622183 GYG2O15488 501 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 CXorf1O96002 111 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 OR5AC1P0C628 307 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 CECR9P0C854 216 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 SLC6A1P30531 599 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 ACOT2P49753 483 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 NUDT2P50583 147 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 CCL23P55773 120 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 BAXQ07812 192 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 XRCC4Q13426 336 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 SYCP1Q15431 976 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 TRAM1Q15629 374 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 TRIP13Q15645 432 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-213ENST00000622183 BSXQ3C1V8 233 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 CEACAM21Q3KPI0 293 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 CLEC18BQ6UXF7 455 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 SPATA24Q86W54 205 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 TMEM25Q86YD3 366 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 KRT222Q8N1A0 295 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 C17orf78Q8N4C9 275 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 ACBD4Q8NC06 268 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 OR2AE1Q8NHA4 323 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 OR5P2Q8WZ92 322 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 ATP6V1G3Q96LB4 118 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 SRRQ9GZT4 340 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 TMEM38BQ9NVV0 291 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 ENPP5Q9UJA9 477 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 SLC22A7Q9Y694 548 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 TUBGCP6Q96RT7 1819 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 PRDM2Q13029 1718 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 EVC2Q86UK5 1308 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 NRCAMQ92823 1304 aa2.68□□□□□ -1.98
CPNE3-213ENST00000622183 RPRD2Q5VT52 1461 aaKnown RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 CD300LBA8K4G0 201 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 FFAR1O14842 300 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 COX7A2P2O60397 106 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 YEATS4O95619 227 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 NRASP01111 189 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 HRASP01112 189 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 KRASP01116 189 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 IGLV7-43P04211 117 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 NQO2P16083 231 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 IMPA1P29218 277 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 RPA3P35244 121 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 LGALS7P47929 136 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 CD164Q04900 197 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 BNIP2Q12982 314 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 FAM53BQ14153 422 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 OR4D1Q15615 310 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 ACTBL2Q562R1 376 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 UBE2NLQ5JXB2 153 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 MRPL2Q5T653 305 aaKnown RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 TPGS1Q6ZTW0 290 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 MRPL52Q86TS9 123 aaKnown RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 LINC00596Q86U02 117 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 OR8A1Q8NGG7 326 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 ERMNQ8TAM6 284 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 ITLN2Q8WWU7 325 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-213ENST00000622183 IFT81Q8WYA0 676 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 CCL17Q92583 94 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 FMC1Q96HJ9 113 aa2.67□□□□□ -1.98
CPNE3-213ENST00000622183 YPEL4Q96NS1 127 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms