RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 GPR157Q5UAW9 335 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 FAM90A2PQ658T7 463 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 NUP54Q7Z3B4 507 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 UBALD2Q8IYN6 164 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 ZNF676Q8N7Q3 588 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 OR51A4Q8NGJ6 313 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 OR4D5Q8NGN0 318 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 CTHRC1Q96CG8 243 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 RBMXL1Q96E39 390 aaKnown RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 TSSK2Q96PF2 358 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 ABHD14AQ9BUJ0 271 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 SDF2L1Q9HCN8 221 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 ZNF701Q9NV72 531 aaPredicted RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 PRR13Q9NZ81 148 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 KLHDC2Q9Y2U9 406 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 TRIOO75962 3097 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 MPDZO75970 2070 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 USP34Q70CQ2 3546 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 ZNF318Q5VUA4 2279 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 C4orf47A7E2U8 309 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 E5RGE8 158 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 IFNL4K9M1U5 179 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 M0R296 226 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 B3GALT2O43825 422 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 GPR137BO60478 399 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 ACAA2P42765 397 aaKnown RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 KIR2DL1P43626 348 aaPredicted RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 ZNF41P51814 821 aaPredicted RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 ITPRIPL2Q3MIP1 535 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 ELOA3BQ3SY89 546 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 SHISA5Q8N114 240 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 ELOA3Q8NG57 546 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 CLDND2Q8NHS1 167 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 PTPMT1Q8WUK0 201 aaPredicted RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 ULBP3Q9BZM4 244 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 DAPP1Q9UN19 280 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 LAMTOR2Q9Y2Q5 125 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 NSG2Q9Y328 171 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 MED19A0JLT2 244 aaPredicted RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 WIPF3A6NGB9 483 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 CEACAM5P06731 702 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 CNN1P51911 297 aaKnown RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 RHOGP84095 191 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 NFATC4Q14934 902 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 LINC01590Q5TEZ4 76 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 OR5D18Q8NGL1 313 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 ZNF845Q96IR2 970 aaPredicted RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 DCBLD2Q96PD2 775 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 GABRG3Q99928 467 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 DNAJB12Q9NXW2 375 aaKnown RBP9.09□□□□□ -0.95
VPS11-207ENST00000620429 ZNF581Q9P0T4 197 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 PAM16Q9Y3D7 125 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 PPIAL4AQ9Y536 164 aa9.09□□□□□ -0.95
VPS11-207ENST00000620429 K7ERU9 68 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 FGF17O60258 216 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 GZMHP20718 246 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 RPS15AP62244 130 aaKnown RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 TMEM196Q5HYL7 178 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 VAX1Q5SQQ9 334 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 LRP11Q86VZ4 500 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 METTL27Q8N6F8 245 aaPredicted RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 OR10S1Q8NGN2 331 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 TMEM37Q8WXS4 190 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 GPR146Q96CH1 333 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 LAMP3Q9UQV4 416 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 H0Y8X5 98 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 VAMP5O95183 116 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 OR6A2O95222 327 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 EML2O95834 649 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 CT62P0C5K7 136 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 ARR3P36575 388 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 CDKN2AP42771 156 aaKnown RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 DMWDQ09019 674 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 ASPHD2Q6ICH7 369 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 PLXDC2Q6UX71 529 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 SLC16A9Q7RTY1 509 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 CENPVQ7Z7K6 275 aaPredicted RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 OR51G1Q8NGK1 321 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 OR2AJ1Q8NGZ0 328 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 ABHD3Q8WU67 409 aa9.08□□□□□ -0.96
VPS11-207ENST00000620429 SRA1Q9HD15 236 aaKnown RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 PHPT1Q9NRX4 125 aaPredicted RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 ARID1BQ8NFD5 2236 aaPredicted RBP9.08□□□□□ -0.96
VPS11-207ENST00000620429 MAP1LC3B2A6NCE7 125 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 HSPB2A8KAH6 182 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 ARPC3O15145 178 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 ADH1BP00325 375 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 TYMSP04818 313 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 CTSBP07858 339 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 ZNF43P17038 809 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 RPS27P42677 84 aaKnown RBP9.07□□□□□ -0.96
VPS11-207ENST00000620429 CLDN6P56747 220 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 ZNF92Q03936 586 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 HSPB2Q16082 182 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 PLPP7Q8NBV4 271 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 OR4B1Q8NGF8 309 aa9.07□□□□□ -0.96
VPS11-207ENST00000620429 RHBDD1Q8TEB9 315 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms