RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	MEGF10	Q96KG7	1140 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	TGIF2	Q9GZN2	237 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	PARPBP	Q9NWS1	579 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	CXorf65	A6NEN9	183 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	FIGNL2	A6NMB9	653 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	SERPINE3	A8MV23	424 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	OR5AC1	P0C628	307 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	FIP1L1	Q6UN15	594 aa	Known RBP	12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	SUMF1	Q8NBK3	374 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	C19orf12	Q9NSK7	152 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	ADAMTS9	Q9P2N4	1935 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	CD63	P08962	238 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	NOVA1	P51513	510 aa	Known RBP	12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	LYZL2	Q7Z4W2	148 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	KMT5C	Q86Y97	462 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	SPTSSA	Q969W0	71 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	SHD	Q96IW2	340 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	OCIAD1	Q9NX40	245 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	CACNA1E	Q15878	2313 aa		12.61	□□□□□ -0.39
SMTN-223	ENST00000619644	DHH	O43323	396 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	F10	P00742	488 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	RBP2	P50120	134 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	PIGY	Q3MUY2	71 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	HAS2	Q92819	552 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	CCDC74B	Q96LY2	380 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	ALKBH3	Q96Q83	286 aa	Predicted RBP	12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	AK3	Q9UIJ7	227 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	ANXA10	Q9UJ72	324 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	DMD	P11532	3685 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644		A0A1W2PQM1	296 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	NXPH3	O95157	252 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF728	P0DKX0	622 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	CCL3	P10147	92 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	HIST1H1B	P16401	226 aa	Known RBP	12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	CCNO	P22674	350 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	OMG	P23515	440 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF124	Q15973	351 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF774	Q6NX45	483 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	SLC22A25	Q6T423	547 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	BORCS8	Q96FH0	119 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	METTL9	Q9H1A3	318 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	MTCH2	Q9Y6C9	303 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	IGHV3-9	P01782	118 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	SPINK2	P20155	84 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	CHAT	P28329	748 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF84	P51523	738 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	OR11L1	Q8NGX0	322 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	MUCL1	Q96DR8	90 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	PBDC1	Q9BVG4	233 aa		12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	PTRH2	Q9Y3E5	179 aa	Known RBP	12.6	□□□□□ -0.39
SMTN-223	ENST00000619644	GEMIN2	O14893	280 aa	Known RBP	12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	SEC11B	P0C7V7	166 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	B4GALT1	P15291	398 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	ENDOG	Q14249	297 aa	Known RBP	12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF674	Q2M3X9	581 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	PDZD11	Q5EBL8	140 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	SPNS3	Q6ZMD2	512 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	FAM89B	Q8N5H3	189 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	PP6455	Q8WZ26	134 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	SH3BGRL3	Q9H299	93 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	TRIOBP	Q9H2D6	2365 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF727	A8MUV8	499 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	PHF1	O43189	567 aa	Predicted RBP	12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	PPP1CC	P36873	323 aa	Known RBP	12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	SOHLH1	Q5JUK2	328 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	SPIN3	Q5JUX0	258 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	UNQ6494/PRO21346	Q6UXR6	183 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	YRDC	Q86U90	279 aa	Known RBP	12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	CARF	Q8N187	725 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	PIGC	Q92535	297 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	GPHA2	Q96T91	129 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	ARV1	Q9H2C2	271 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF442	Q9H7R0	627 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	WFDC1	Q9HC57	220 aa		12.59	□□□□□ -0.39
SMTN-223	ENST00000619644	IGHV5-10-1	A0A0J9YXX1	117 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	HSPB6	O14558	160 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	GAMT	Q14353	236 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	SHB	Q15464	509 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	FBXW12	Q6X9E4	464 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF610	Q8N9Z0	462 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	RHBDD1	Q8TEB9	315 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	LIME1	Q9H400	295 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	CRLF2	Q9HC73	371 aa		12.58	□□□□□ -0.39
SMTN-223	ENST00000619644	FRY	Q5TBA9	3013 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	AHCTF1	Q8WYP5	2266 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	TRAPPC6A	O75865	159 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	NDUFB7	P17568	137 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	ZNF343	Q6P1L6	599 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	STX12	Q86Y82	276 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	FBXL14	Q8N1E6	418 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	SUMF2	Q8NBJ7	301 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	GALNT14	Q96FL9	552 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	MRPS17	Q9Y2R5	130 aa	Known RBP	12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	OR7C1	O76099	320 aa	Predicted RBP	12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	MBP	P02686	304 aa	Predicted RBP	12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	CCL1	P22362	96 aa		12.58	□□□□□ -0.4
SMTN-223	ENST00000619644	NHLH2	Q02577	135 aa		12.58	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms