RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NOVA1P51513 510 aaKnown RBP6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 NDUFA6P56556 154 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 SSPNQ14714 243 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 ANKRD55Q3KP44 614 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 FBXW12Q6X9E4 464 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 LURAP1LQ8IV03 231 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 GPR119Q8TDV5 335 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 RNF133Q8WVZ7 376 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 CHST11Q9NPF2 352 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 CYTL1Q9NRR1 136 aa6.13□□□□□ -1.43
SRGAP3-213ENST00000618999 COLCA2A8K830 154 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 F10P00742 488 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 TTRP02766 147 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 GAPDHP04406 335 aaKnown RBP6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 ARG1P05089 322 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 CYC1P08574 325 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 FOLR2P14207 255 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 UBE2KP61086 200 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 DOK3Q7L591 496 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SPACA9Q96E40 222 aaPredicted RBP6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 KLHDC3Q9BQ90 382 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 C19orf12Q9NSK7 152 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 METTL1Q9UBP6 276 aaKnown RBP6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 AMDHD2Q9Y303 409 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 GVINP1Q7Z2Y8 2422 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 CEP250Q9BV73 2442 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 LOC102723996A0A087X1L8 192 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 LOC390937A0A1W2PQ73 354 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 FCGR2AP12318 317 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 HLA-DOBP13765 273 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 HAAOP46952 286 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SULT1A1P50225 295 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SSR4P51571 173 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SURF2Q15527 256 aaPredicted RBP6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 C10orf91Q5T1B1 145 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 IMMP1LQ96LU5 166 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 LPAR5Q9H1C0 372 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SLC35B3Q9H1N7 401 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 HEATR5AQ86XA9 2040 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 A0A1W2PNU3 283 aaPredicted RBP6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 FAM230AA0A1W2PPH8 454 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 A0A1W2PQD3 144 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SERPINE3A8MV23 424 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 F5H5K5 113 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 GATCO43716 136 aaKnown RBP6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 FAM157CP0CG43 387 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF728P0DKX0 622 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF43P17038 809 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SLC35A1P78382 337 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 NCMAPQ5T1S8 102 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 OR2A2Q6IF42 318 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 ETV3LQ6ZN32 361 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 TMEM182Q6ZP80 229 aaPredicted RBP6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 PPP1R32Q7Z5V6 425 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 POC1AQ8NBT0 407 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 TMEM104Q8NE00 496 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 SEMA6DQ8NFY4 1073 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 M1APQ8TC57 530 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 OR5B2Q96R09 309 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 NELFAQ9H3P2 528 aa6.12□□□□□ -1.43
SRGAP3-213ENST00000618999 TMEM14DPA8MWL7 114 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 UBE2CO00762 179 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 DIRAS3O95661 229 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 OPN1LWP04000 364 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 HKR1P10072 659 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 TAGLN2P37802 199 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF121P58317 390 aaPredicted RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 FAM3AP98173 230 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 RSU1Q15404 277 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 TGIF1Q15583 401 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 FNDC7Q5VTL7 733 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 MBNL2Q5VZF2 373 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 GGNBP1Q5YKI7 109 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ARL6IP6Q8N6S5 226 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 CCDC71LQ8N9Z2 235 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ASB10Q8WXI3 467 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 NAA11Q9BSU3 229 aaPredicted RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 GAR1Q9NY12 217 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 C5orf52A6NGY3 159 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 PPP1R2P9O14990 202 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ST8SIA3O43173 380 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 XRCC2O43543 280 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 EIF1BO60739 113 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ACTL6BO94805 426 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 APOBEC1P41238 236 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 EIF1P41567 113 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 P2RY4P51582 365 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF266Q14584 549 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 DMRTC1Q5HYR2 192 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 THEM4Q5T1C6 240 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ASPHD2Q6ICH7 369 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 MEX3BQ6ZN04 569 aaKnown RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ZNF600Q6ZNG1 722 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 PIP4P1Q86T03 277 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 PAQR4Q8N4S7 273 aaPredicted RBP6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 OR13G1Q8NGZ3 307 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 ST8SIA1Q92185 356 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 CACFD1Q9UGQ2 172 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 IL17BQ9UHF5 180 aa6.11□□□□□ -1.43
SRGAP3-213ENST00000618999 A0A1W2PPE2 198 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms