RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 LPAR3Q9UBY5 353 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 NYNRINQ9P2P1 1898 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 CHD5Q8TDI0 1954 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 IGKV1D-42A0A075B6H8 117 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 TRAF3IP2O43734 574 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 COX5BP10606 129 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 S100A11P31949 105 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 TEX30Q5JUR7 227 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 MRGPRGQ86SM5 289 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 CDH26Q8IXH8 852 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 MUC20Q8N307 709 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 UBALD1Q8TB05 177 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 ADTRPQ96IZ2 230 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 C2orf50Q96LR7 162 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PECRQ9BY49 303 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 HEXA-AS1Q9H8Q6 139 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 CYB5R1Q9UHQ9 305 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 STARD10Q9Y365 291 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 NPTNQ9Y639 398 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 TMEM229AB2RXF0 380 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 SMLR1H3BR10 107 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 GZMHP20718 246 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 UBE2MP61081 183 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 STUMQ69YW2 141 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 CADM3Q8N126 398 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PLPPR2Q96GM1 343 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 MRPS18CQ9Y3D5 142 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PPIAL4EA0A075B759 164 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 IGLV1-36A0A0B4J1U3 117 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 OOEPA6NGQ2 149 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 KRBOX1C9JBD0 128 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 E5RGE8 158 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PPIAL4DF5H284 164 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 NPIPB9F8W1W9 429 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 IFNL4K9M1U5 179 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 TAAR5O14804 337 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 CD1AP06126 327 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 RFPL3SP0C7P2 107 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PPIAL4FP0DN26 164 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 BCL3P20749 454 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PSMB6P28072 239 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PDZK1IP1Q13113 114 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 IRF3Q14653 427 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 ASB13Q8WXK3 278 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 TCEAL7Q9BRU2 100 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 TINAGL1Q9GZM7 467 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PLEKHA2Q9HB19 425 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 SERTAD4Q9NUC0 356 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 NSG2Q9Y328 171 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 RNF115Q9Y4L5 304 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 PPIAL4AQ9Y536 164 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 TANC1Q9C0D5 1861 aa8.25□□□□□ -1.09
CLTCL1-208ENST00000615606 GABRB1P18505 474 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 BRS3P32247 399 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 PPT1P50897 306 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 RPL11P62913 178 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 SNRPNP63162 240 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 ADAM5Q6NVV9 412 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 CLEC2AQ6UVW9 174 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 SPACA3Q8IXA5 215 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 OR10AC1Q8NH08 325 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 TMEM45BQ96B21 275 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 TMEM56Q96MV1 263 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 LINC00470Q9BZP3 86 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 CISD1Q9NZ45 108 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 CNOT1A5YKK6 2376 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 DEFB108AA8MXU0 73 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 M0QZ24 198 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 LY86O95711 162 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 IGHMP01871 453 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 TTRP02766 147 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 HTD2P86397 168 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 FAM74A1Q5RGS3 127 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 ZBTB37Q5TC79 503 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 CMTM2Q8TAZ6 248 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 RNF141Q8WVD5 230 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 C19orf12Q9NSK7 152 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 CLN8Q9UBY8 286 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 ZNF230Q9UIE0 474 aaPredicted RBP8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 CSAG2Q9Y5P2 127 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 MTCL1Q9Y4B5 1905 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 SSSCA1O60232 199 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 SULT1A3P0DMM9 295 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 SULT1A4P0DMN0 295 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 ROM1Q03395 351 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 OXA1LQ15070 435 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 LINC00303Q3SY05 128 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 OR5AP2Q8NGF4 316 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 FAM57AQ8TBR7 257 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 MAP6Q96JE9 813 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 WFDC6Q9BQY6 131 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 PURGQ9UJV8 347 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 FLVCR2Q9UPI3 526 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 RPS10-NUDT3A0A1W2PQS6 291 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 K7EQM0 130 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 TPPPO94811 219 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 BAK1Q16611 211 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 Q3ZCU0 254 aa8.24□□□□□ -1.09
CLTCL1-208ENST00000615606 TREM2Q9NZC2 230 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms