RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 VEGFCP49767 419 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 TMEM50BP56557 158 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 FGF12P61328 243 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 MZT1Q08AG7 82 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 TAF9Q16594 264 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 PCGF3Q3KNV8 242 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 OLFML2AQ68BL7 652 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 Q6P435 159 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 ACP7Q6ZNF0 438 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 DNM1P46Q6ZS02 220 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 Q71RC1 249 aaPredicted RBP6.74□□□□□ -1.33
PCDH9-205ENST00000614931 LRRC28Q86X40 367 aaPredicted RBP6.74□□□□□ -1.33
PCDH9-205ENST00000614931 FAM58AQ8N1B3 248 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 OSR2Q8N2R0 312 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 FAM89BQ8N5H3 189 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 BOLLQ8N9W6 283 aaKnown RBP6.74□□□□□ -1.33
PCDH9-205ENST00000614931 OR51T1Q8NGJ9 327 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 KCNG3Q8TAE7 436 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 GCDHQ92947 438 aaPredicted RBP6.74□□□□□ -1.33
PCDH9-205ENST00000614931 EMG1Q92979 244 aaKnown RBP6.74□□□□□ -1.33
PCDH9-205ENST00000614931 PTX4Q96A99 478 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 DIRAS2Q96HU8 199 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 SDHCQ99643 169 aaPredicted RBP6.74□□□□□ -1.33
PCDH9-205ENST00000614931 MRI1Q9BV20 369 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 CST11Q9H112 138 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 ATG5Q9H1Y0 275 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 MS4A5Q9H3V2 200 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 FN3KRPQ9HA64 309 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 HMG20AQ9NP66 347 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 FAIMQ9NVQ4 179 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 RNF7Q9UBF6 113 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 EXTL2Q9UBQ6 330 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 GHRLQ9UBU3 117 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 PPP1R3CQ9UQK1 317 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 POLDIP2Q9Y2S7 368 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 ACANP16112 2415 aa6.74□□□□□ -1.33
PCDH9-205ENST00000614931 C2CD3Q4AC94 2353 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 IGHV1-69-2A0A0G2JMI3 117 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 A0A0G2JMP0 313 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 A0A0X1KG70 313 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 A0A1B0GW55 424 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 J3QRK9 145 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 GEMIN2O14893 280 aaKnown RBP6.73□□□□□ -1.33
PCDH9-205ENST00000614931 SMAD7O15105 426 aaKnown RBP6.73□□□□□ -1.33
PCDH9-205ENST00000614931 NXPH2O95156 264 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 IGHV4-39P01824 125 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 CSTBP04080 98 aaKnown RBP6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4L2P0CJ85 424 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4L3P0CJ86 424 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4L4P0CJ87 422 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4L5P0CJ88 424 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4L6P0CJ89 424 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4L7P0CJ90 424 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 TNFRSF1AP19438 455 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 AMY2BP19961 511 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 GABRR1P24046 479 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 CHATP28329 748 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 CAPZA1P52907 286 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 TAS2R20P59543 309 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 CLEC12BQ2HXU8 276 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 ZNF181Q2M3W8 571 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 NHLRC3Q5JS37 347 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 PLAC9Q5JTB6 97 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4L9Q6RFH8 374 aaPredicted RBP6.73□□□□□ -1.33
PCDH9-205ENST00000614931 OR4M2Q8NGB6 313 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 CMTM3Q96MX0 182 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 TSC22D3Q99576 134 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 S100A13Q99584 98 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 EGLN1Q9GZT9 426 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DECR2Q9NUI1 292 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 TMEM106BQ9NUM4 274 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 DUX4Q9UBX2 424 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 METRNQ9UJH8 293 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 ZNF222Q9UK12 451 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 ST3GAL6Q9Y274 331 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 KCNK7Q9Y2U2 307 aa6.73□□□□□ -1.33
PCDH9-205ENST00000614931 SETD2Q9BYW2 2564 aaPredicted RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ARHGAP32A7KAX9 2087 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 IGKV1D-17A0A075B6S4 117 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 TRAV18A0A075B6X5 111 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 TMEM178BH3BS89 294 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 MFNGO00587 321 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 XRCC3O43542 346 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ZNF780AO75290 641 aaPredicted RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 FCN3O75636 299 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 CYB5AP00167 134 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 HLA-DQB1P01920 261 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 PSG2P11465 335 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 GTF2F2P13984 249 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 SELLP14151 372 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 GLRA1P23415 457 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 S100A5P33763 92 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 MNDAP41218 407 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 PITPNBP48739 271 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 GUCA2AQ02747 115 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 GPR176Q14439 515 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 IL13RA2Q14627 380 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ZNF260Q3ZCT1 412 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 RNASE12Q5GAN4 147 aaKnown RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 SFRP4Q6FHJ7 346 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms