RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 DOCK3Q8IZD9 2030 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 hCG_1809904A0A1W2PP81 198 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 A0A1W2PR64 198 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 A0A1W2PRV1 198 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 CD74P04233 296 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 TRA2AQ13595 282 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 WDR74Q6RFH5 385 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZNF331Q9NQX6 463 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 SLC2A9Q9NRM0 540 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 NPTNQ9Y639 398 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 ABCD4O14678 606 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 SLC25A6P12236 298 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 SRD5A2P31213 254 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 FAM3AP98173 230 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 MGAT2Q10469 447 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 PDCD1Q15116 288 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 GUCA2BQ16661 112 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 TMEM241Q24JQ0 296 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 OR2A2Q6IF42 318 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 TMEM104Q8NE00 496 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 WDR13Q9H1Z4 485 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 SIRT7Q9NRC8 400 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 MTCH1Q9NZJ7 389 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 GPR132Q9UNW8 380 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 TMEM30CPA0ZSE6 113 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 NKX6-3A6NJ46 265 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 CD8AP01732 235 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 CST2P09228 141 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 PPP1CBP62140 327 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 POLR2GP62487 172 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 SLC38A11Q08AI6 406 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 SLC10A1Q14973 349 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 PABPC1L2AQ5JQF8 200 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 TBC1D26Q86UD7 250 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 CISD2Q8N5K1 135 aaKnown RBP9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 UBAC2Q8NBM4 344 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 OR10V1Q8NGI7 309 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZPBPQ9BS86 351 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 SLC2A8Q9NY64 477 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 DUSP13Q9UII6 198 aa9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 ERRFI1Q9UJM3 462 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-206ENST00000611976 IGKV1D-42A0A075B6H8 117 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 MASP2O00187 686 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 PHOX2AO14813 284 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 GPR37O15354 613 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 RECKO95980 971 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 OPN1MWP04001 364 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 OPN1MW2P0DN77 364 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 OPN1MW3P0DN78 364 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 TMEM211Q6ICI0 200 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 AMDHD2Q9Y303 409 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZNF320A2RRD8 509 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 TSPAN2O60636 221 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZIC2O95409 532 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ARG1P05089 322 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 HOXD4P09016 255 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 VDAC1P21796 283 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 MPGP29372 298 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 DYNLT3P51808 116 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 CASP6P55212 293 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 RAC3P60763 192 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 PMP22Q01453 160 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 EWSR1Q01844 656 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 TIGITQ495A1 244 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 FAM58AQ8N1B3 248 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZNF784Q8NCA9 323 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 RASL10BQ96S79 203 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 LPAR5Q9H1C0 372 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 MYOZ1Q9NP98 299 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 CHD5Q8TDI0 1954 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 SBF1O95248 1867 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 GREB1Q4ZG55 1949 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 WDR81Q562E7 1941 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 FAM74A7A6NL05 159 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 H3BMH7 237 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 PNPP00491 289 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 MUC1P15941 1255 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 BTCP35070 178 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 FOXO1Q12778 655 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 WIPI1Q5MNZ9 446 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 TXN2Q99757 166 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 RAB33BQ9H082 229 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZNF586Q9NXT0 402 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 PPYP01298 95 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 IGLV3-21P80748 117 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 GUSBP11Q6P575 273 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZNF439Q8NDP4 499 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 AQP10Q96PS8 301 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 LIPGQ9Y5X9 500 aa9.61□□□□□ -0.87
CDC42EP3-206ENST00000611976 ARL3P36405 182 aa9.6□□□□□ -0.87
CDC42EP3-206ENST00000611976 GALR1P47211 349 aa9.6□□□□□ -0.87
CDC42EP3-206ENST00000611976 TSPO2Q5TGU0 170 aa9.6□□□□□ -0.87
CDC42EP3-206ENST00000611976 ZNF66Q6ZN08 573 aa9.6□□□□□ -0.87
CDC42EP3-206ENST00000611976 SLC36A1Q7Z2H8 476 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms